RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 CD3EAPO15446 510 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 DFNA5O60443 496 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 FOXD2O60548 495 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 RASGRP1O95267 797 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 TNFP01375 233 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 CEACAM5P06731 702 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 JUNDP17535 347 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 MSH3P20585 1137 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ACRV1P26436 265 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 PPARGP37231 505 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 TMEM115Q12893 351 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 EIF2B5Q13144 721 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ALG11Q2TAA5 492 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 UNC5AQ6ZN44 842 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 CAPN12Q6ZSI9 719 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ADGRG6Q86SQ4 1221 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 PIANPQ8IYJ0 282 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 MINDY1Q8N5J2 469 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 OR1E3Q8WZA6 343 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 PDXPQ96GD0 296 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 DCUN1D1Q96GG9 259 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 SGSM3Q96HU1 749 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 WDR83Q9BRX9 315 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 EDEM2Q9BV94 578 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 SLC13A1Q9BZW2 595 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 TSPYL1Q9H0U9 437 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 OR2AG1Q9H205 316 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 CARS2Q9HA77 564 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 IL21RQ9HBE5 538 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ATXN10Q9UBB4 475 aa14.33□□□□□ -0.12
TNFRSF1A-216ENST00000543995 AGAP14A8MT82 685 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 CFAP99D6REC4 459 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 SCAMP1O15126 338 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 VEGFDO43915 354 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 SDC3O75056 442 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 CDK14O94921 469 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 CSF2P04141 144 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 RALBP11234 206 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 NME1P15531 152 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ARNTP27540 789 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 PMLP29590 882 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 GNPDA1P46926 289 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ARCN1P48444 511 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 HK3P52790 923 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 IL9RQ01113 521 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ZNF423Q2M1K9 1284 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 KHDC1Q4VXA5 237 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 AARS2Q5JTZ9 985 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 LYPLAL1Q5VWZ2 237 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 MRNIPQ6NTE8 343 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 SDCCAG8Q86SQ7 713 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 LDB1Q86U70 411 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 KCNMB4Q86W47 210 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 PHACTR4Q8IZ21 702 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 COPS8Q99627 209 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 PPANQ9NQ55 473 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ZDHHC3Q9NYG2 299 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 APOBEC3BQ9UH17 382 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ZNHIT2Q9UHR6 403 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 PNMA8BQ9ULN7 279 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 SUFUQ9UMX1 484 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 GPSM3Q9Y4H4 160 aa14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 V9GYY5 206 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF1A-216ENST00000543995 TRBV5-4A0A0C4DH59 114 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 A0A1B0GTQ1 180 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 GPR89AB7ZAQ6 455 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 IVLP07476 585 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 GPR89BP0CG08 455 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 CTSEP14091 401 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ZNF8P17098 575 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 TGM1P22735 817 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 ECHS1P30084 290 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 MAGEA4P43358 317 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 CCT8P50990 548 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 HNRNPKP61978 463 aaKnown RBP eCLIP14.31□□□□□ -0.127e-7■■■□□ 16.2
TNFRSF1A-216ENST00000543995 CBLBQ13191 982 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 TCEA2Q15560 299 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 DBN1Q16643 649 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 KCTD16Q68DU8 428 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 NEPROQ6NW34 567 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 CERS6Q6ZMG9 384 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 DET1Q7L5Y6 550 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 GALNT13Q8IUC8 556 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 RBFAQ8N0V3 343 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 GABPB2Q8TAK5 448 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 HEXDCQ8WVB3 486 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 CERS2Q96G23 380 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 C9orf72Q96LT7 481 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 CAAP1Q9H8G2 361 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 RMI1Q9H9A7 625 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 RXFP3Q9NSD7 469 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 MARCH4Q9P2E8 410 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 KLF15Q9UIH9 416 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 PRKAB1Q9Y478 270 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 DGKBQ9Y6T7 804 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 GPR179Q6PRD1 2367 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 PFDN6O15212 129 aa14.31□□□□□ -0.12
TNFRSF1A-216ENST00000543995 YKT6O15498 198 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms