RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 VEGFDO43915 354 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 CSRP1P21291 193 aaKnown RBP14.92□□□□□ -0.02
CD9-210ENST00000543916 FOXN2P32314 431 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 ITGA8P53708 1063 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 TMEM115Q12893 351 aaPredicted RBP14.92□□□□□ -0.02
CD9-210ENST00000543916 MORF4L2Q15014 288 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 ELOCQ15369 112 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 LDLRAP1Q5SW96 308 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 FNBP1LQ5T0N5 605 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 PSAPL1Q6NUJ1 521 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 CES3Q6UWW8 571 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 NRROSQ86YC3 692 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 GALNT13Q8IUC8 556 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 PIANPQ8IYJ0 282 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 NXPE1Q8N323 547 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 GPBAR1Q8TDU6 330 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 PEX13Q92968 403 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 SIGLEC10Q96LC7 697 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 PWWP2AQ96N64 755 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 ERP44Q9BS26 406 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 DPH5Q9H2P9 285 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 MRM3Q9HC36 420 aaKnown RBP14.92□□□□□ -0.02
CD9-210ENST00000543916 TRNAU1APQ9NX07 287 aaKnown RBP14.92□□□□□ -0.02
CD9-210ENST00000543916 NLGN3Q9NZ94 848 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 ZNHIT2Q9UHR6 403 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 CRLS1Q9UJA2 301 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 GPSM3Q9Y4H4 160 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 NEMP2A6NFY4 417 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 SDR42E2A6NKP2 422 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 CHUKO15111 745 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 YY2O15391 372 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 SIGLEC6O43699 453 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 BANF1O75531 89 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 CDK14O94921 469 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 GOT2P00505 430 aaKnown RBP14.91□□□□□ -0.02
CD9-210ENST00000543916 AK4P27144 223 aaPredicted RBP14.91□□□□□ -0.02
CD9-210ENST00000543916 AKT1P31749 480 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 ID4P47928 161 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 B4GALNT1Q00973 533 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 CTBSQ01459 385 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 CACNG1Q06432 222 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 PUM1Q14671 1186 aaKnown RBP eCLIP14.91□□□□□ -0.02
CD9-210ENST00000543916 GPR33Q49SQ1 333 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 MSS51Q4VC12 460 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 DUPD1Q68J44 220 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 CASC4Q6P4E1 433 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 AFTPHQ6ULP2 937 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 CRTC3Q6UUV7 619 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 SERPINA9Q86WD7 417 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 PNPLA1Q8N8W4 532 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 RASGEF1AQ8N9B8 481 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 NOA1Q8NC60 698 aaKnown RBP14.91□□□□□ -0.02
CD9-210ENST00000543916 NAT14Q8WUY8 206 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 ULK4Q96C45 1275 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 MFSD3Q96ES6 412 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 LRRC1Q9BTT6 524 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 SLC32A1Q9H598 525 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 RMI1Q9H9A7 625 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 GRHL1Q9NZI5 618 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 SAMD15Q9P1V8 674 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 ANAPC5Q9UJX4 755 aa14.91□□□□□ -0.02
CD9-210ENST00000543916 GPR89AB7ZAQ6 455 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 GRID2O43424 1007 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 KCNK5O95279 499 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 ANXA6P08133 673 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 GPR89BP0CG08 455 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 ALPPL2P10696 532 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 ACRV1P26436 265 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 ARNTP27540 789 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 NOVA1P51513 510 aaKnown RBP14.9□□□□□ -0.02
CD9-210ENST00000543916 CTSCP53634 463 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 PRAMEP78395 509 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 DHX9Q08211 1270 aaKnown RBP14.9□□□□□ -0.02
CD9-210ENST00000543916 ILF3Q12906 894 aaKnown RBP eCLIP14.9□□□□□ -0.02
CD9-210ENST00000543916 SEMA3AQ14563 771 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 DBN1Q16643 649 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 PROX2Q3B8N5 592 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 PLA2G4EQ3MJ16 856 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 C8orf74Q6P047 294 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 CHST15Q7LFX5 561 aaPredicted RBP14.9□□□□□ -0.02
CD9-210ENST00000543916 TAS2R42Q7RTR8 314 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 TAF8Q7Z7C8 310 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 GKN2Q86XP6 184 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 ZNF547Q8IVP9 402 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 MMGT1Q8N4V1 131 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 MNS1Q8NEH6 495 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 OR6P1Q8NGX9 317 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 OR4L1Q8NH43 312 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 CNDP2Q96KP4 475 aaKnown RBP14.9□□□□□ -0.02
CD9-210ENST00000543916 FCRL3Q96P31 734 aaPredicted RBP14.9□□□□□ -0.02
CD9-210ENST00000543916 BOCQ9BWV1 1114 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 ZCCHC2Q9C0B9 1178 aaKnown RBP14.9□□□□□ -0.02
CD9-210ENST00000543916 ZDHHC3Q9NYG2 299 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 FTSJ1Q9UET6 329 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 DOLKQ9UPQ8 538 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 DCHS1Q96JQ0 3298 aa14.9□□□□□ -0.02
CD9-210ENST00000543916 IGLV3-16A0A075B6K0 115 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 LY6G6EA0A0G2JKS1 128 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 FAM237BA0A1B0GVD1 139 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 SPAARA0A1B0GVQ0 90 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms