RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 TFR2Q9UP52 801 aa15.34■□□□□ 0.05
CSF1R-209ENST00000543093 KCNK6Q9Y257 313 aa15.34■□□□□ 0.05
CSF1R-209ENST00000543093 LOC101059948A0A1B0GTJ6 334 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 KCNK1O00180 336 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 CAPN5O15484 640 aaPredicted RBP15.33■□□□□ 0.04
CSF1R-209ENST00000543093 SNX2O60749 519 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 PRLP01236 227 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 PRKAR1AP10644 381 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 ACP5P13686 325 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 FECHP22830 423 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 MAP4P27816 1152 aaKnown RBP15.33■□□□□ 0.04
CSF1R-209ENST00000543093 IFI35P80217 286 aaPredicted RBP15.33■□□□□ 0.04
CSF1R-209ENST00000543093 SKIDA1Q1XH10 827 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 MFSD7Q6UXD7 560 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 CEACAM20Q6UY09 585 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 UNC5BQ8IZJ1 945 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 ARRDC2Q8TBH0 407 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 SH3KBP1Q96B97 665 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 SLC45A3Q96JT2 553 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 OLFM3Q96PB7 478 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 WDR24Q96S15 920 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 SPRY4Q9C004 299 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 EPN3Q9H201 632 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 GOLPH3Q9H4A6 298 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 PCDH9Q9HC56 1237 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 APMAPQ9HDC9 416 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 FBXO8Q9NRD0 319 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 KLHL3Q9UH77 587 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 TUBD1Q9UJT1 453 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 ALG6Q9Y672 507 aa15.33■□□□□ 0.04
CSF1R-209ENST00000543093 PTPN13Q12923 2485 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 NAV2Q8IVL1 2488 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 ZNF106Q9H2Y7 1883 aaKnown RBP15.32■□□□□ 0.04
CSF1R-209ENST00000543093 C1orf232A0A0U1RR37 186 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 FADS2P1A8MWK0 482 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 JCHAINP01591 159 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 CDKN2BP42772 138 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 NIPAL4Q0D2K0 466 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 CDC20Q12834 499 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 ZBTB17Q13105 803 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 TFDP2Q14188 446 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 IYDQ6PHW0 289 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 NPNTQ6UXI9 565 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 SPOCD1Q6ZMY3 1216 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 LYSMD3Q7Z3D4 306 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 TIPARPQ7Z3E1 657 aaKnown RBP15.32■□□□□ 0.04
CSF1R-209ENST00000543093 KDELC2Q7Z4H8 507 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 DAAM2Q86T65 1068 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 SLC9B2Q86UD5 537 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 CCDC50Q8IVM0 306 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 RAVER1Q8IY67 606 aaKnown RBP15.32■□□□□ 0.04
CSF1R-209ENST00000543093 KATNAL2Q8IYT4 538 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 CALR3Q96L12 384 aaKnown RBP15.32■□□□□ 0.04
CSF1R-209ENST00000543093 HERPUD2Q9BSE4 406 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 BRD8Q9H0E9 1235 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 FAM83DQ9H4H8 585 aa15.32■□□□□ 0.04
CSF1R-209ENST00000543093 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.32■□□□□ 0.04
CSF1R-209ENST00000543093 EPN1Q9Y6I3 576 aaPredicted RBP15.32■□□□□ 0.04
CSF1R-209ENST00000543093 A6NCN8 305 aa15.31■□□□□ 0.04
CSF1R-209ENST00000543093 STK17BO94768 372 aa15.31■□□□□ 0.04
CSF1R-209ENST00000543093 F3P13726 295 aa15.31■□□□□ 0.04
CSF1R-209ENST00000543093 SLC2A4P14672 509 aa15.31■□□□□ 0.04
CSF1R-209ENST00000543093 CD86P42081 329 aa15.31■□□□□ 0.04
CSF1R-209ENST00000543093 NR2C2P49116 596 aa15.31■□□□□ 0.04
CSF1R-209ENST00000543093 SPINT3P49223 89 aa15.31■□□□□ 0.04
CSF1R-209ENST00000543093 EPHA4P54764 986 aa15.31■□□□□ 0.04
CSF1R-209ENST00000543093 RPL26P61254 145 aaKnown RBP15.31■□□□□ 0.04
CSF1R-209ENST00000543093 TFDP3Q5H9I0 405 aa15.31■□□□□ 0.04
CSF1R-209ENST00000543093 HENMT1Q5T8I9 393 aaKnown RBP15.31■□□□□ 0.04
CSF1R-209ENST00000543093 BZW1Q7L1Q6 419 aaKnown RBP15.31■□□□□ 0.04
CSF1R-209ENST00000543093 C9orf43Q8TAL5 461 aaPredicted RBP15.31■□□□□ 0.04
CSF1R-209ENST00000543093 RBM41Q96IZ5 413 aaKnown RBP15.31■□□□□ 0.04
CSF1R-209ENST00000543093 LYSMD1Q96S90 227 aa15.31■□□□□ 0.04
CSF1R-209ENST00000543093 ZPBPQ9BS86 351 aa15.31■□□□□ 0.04
CSF1R-209ENST00000543093 EFHD1Q9BUP0 239 aa15.31■□□□□ 0.04
CSF1R-209ENST00000543093 TBC1D10AQ9BXI6 508 aa15.31■□□□□ 0.04
CSF1R-209ENST00000543093 CEP41Q9BYV8 373 aa15.31■□□□□ 0.04
CSF1R-209ENST00000543093 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.31■□□□□ 0.04
CSF1R-209ENST00000543093 RMI1Q9H9A7 625 aa15.31■□□□□ 0.04
CSF1R-209ENST00000543093 ZNF71Q9NQZ8 489 aaPredicted RBP15.31■□□□□ 0.04
CSF1R-209ENST00000543093 PKD2L2Q9NZM6 624 aa15.31■□□□□ 0.04
CSF1R-209ENST00000543093 RPL26L1Q9UNX3 145 aaKnown RBP15.31■□□□□ 0.04
CSF1R-209ENST00000543093 TMEM184BQ9Y519 407 aaPredicted RBP15.31■□□□□ 0.04
CSF1R-209ENST00000543093 BSNQ9UPA5 3926 aa15.31■□□□□ 0.04
CSF1R-209ENST00000543093 KIR2DS5A0A0G2JLQ3 304 aa15.3■□□□□ 0.04
CSF1R-209ENST00000543093 A0A0G2JNG1 304 aa15.3■□□□□ 0.04
CSF1R-209ENST00000543093 KIR2DS3K7RE56 304 aa15.3■□□□□ 0.04
CSF1R-209ENST00000543093 POLR1CO15160 346 aaPredicted RBP15.3■□□□□ 0.04
CSF1R-209ENST00000543093 GRID2O43424 1007 aa15.3■□□□□ 0.04
CSF1R-209ENST00000543093 CST8O60676 142 aa15.3■□□□□ 0.04
CSF1R-209ENST00000543093 OAS2P29728 719 aaKnown RBP15.3■□□□□ 0.04
CSF1R-209ENST00000543093 CDC25BP30305 580 aa15.3■□□□□ 0.04
CSF1R-209ENST00000543093 MARCKSL1P49006 195 aa15.3■□□□□ 0.04
CSF1R-209ENST00000543093 NAP1L1P55209 391 aaKnown RBP15.3■□□□□ 0.04
CSF1R-209ENST00000543093 SRSF1Q07955 248 aaKnown RBP eCLIP15.3■□□□□ 0.04
CSF1R-209ENST00000543093 ABHD18Q0P651 414 aa15.3■□□□□ 0.04
CSF1R-209ENST00000543093 KIR2DS5Q14953 304 aa15.3■□□□□ 0.04
CSF1R-209ENST00000543093 TAZQ16635 292 aa15.3■□□□□ 0.04
CSF1R-209ENST00000543093 QPCTQ16769 361 aa15.3■□□□□ 0.04
CSF1R-209ENST00000543093 KAZNQ674X7 775 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms