RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 SLC24A4Q8NFF2 622 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 OR13F1Q8NGS4 319 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 PHF10Q8WUB8 498 aaKnown RBP4.32□□□□□ -1.72
SNHG1-219ENST00000542112 PYDC1Q8WXC3 89 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 SHC3Q92529 594 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 ELMO1Q92556 727 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 GTF3AQ92664 365 aaKnown RBP4.32□□□□□ -1.72
SNHG1-219ENST00000542112 APBB2Q92870 758 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 SLCO2A1Q92959 643 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 ART4Q93070 314 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 RFKQ969G6 155 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 SLC22A18Q96BI1 424 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 AP2M1Q96CW1 435 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 OXNAD1Q96HP4 312 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-219ENST00000542112 GCNAQ96QF7 691 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 NELL2Q99435 816 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 BDH2Q9BUT1 245 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 TRIM62Q9BVG3 475 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 ALX4Q9H161 411 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-219ENST00000542112 DUSP15Q9H1R2 295 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-219ENST00000542112 NEUROG2Q9H2A3 272 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 OR51M1Q9H341 326 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 SMYD3Q9H7B4 428 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 LRRC40Q9H9A6 602 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 UNKLQ9H9P5 680 aaKnown RBP4.32□□□□□ -1.72
SNHG1-219ENST00000542112 NANOGQ9H9S0 305 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 ARNT2Q9HBZ2 717 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 HPS4Q9NQG7 708 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 NECTIN3Q9NQS3 549 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 PRDM11Q9NQV5 511 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 BIN3Q9NQY0 253 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 SEMA3GQ9NS98 782 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 ARL8BQ9NVJ2 186 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 MED9Q9NWA0 146 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 PAK1IP1Q9NWT1 392 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-219ENST00000542112 COA4Q9NYJ1 87 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 OR6C2Q9NZP2 312 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 HEY2Q9UBP5 337 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 ARMCX3Q9UH62 379 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-219ENST00000542112 CYTH4Q9UIA0 394 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 KLHL21Q9UJP4 597 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 ADAMTS6Q9UKP5 1117 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 AMFRQ9UKV5 643 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 COG5Q9UP83 839 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 MRPS7Q9Y2R9 242 aaKnown RBP4.32□□□□□ -1.72
SNHG1-219ENST00000542112 GPR55Q9Y2T6 319 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-219ENST00000542112 SAMHD1Q9Y3Z3 626 aaKnown RBP4.32□□□□□ -1.72
SNHG1-219ENST00000542112 SRPRBQ9Y5M8 271 aaKnown RBP4.32□□□□□ -1.72
SNHG1-219ENST00000542112 COPG1Q9Y678 874 aaKnown RBP4.32□□□□□ -1.72
SNHG1-219ENST00000542112 FKBP7Q9Y680 259 aa4.32□□□□□ -1.72
SNHG1-219ENST00000542112 DISP2A7MBM2 1401 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 XDHP47989 1333 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 PNMA8CA0A1B0GUJ8 204 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 A0A1W2PPW3 197 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 FAM92AA1XBS5 289 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 ARHGAP42A6NI28 874 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 ZNF729A6NN14 1252 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 NT5C1B-RDH14C9J2C7 533 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 hCG_1984214I3L0E3 225 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 SNAP23O00161 211 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 MEIS1O00470 390 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 KPNA3O00505 521 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 CTDSP2O14595 271 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 KCNK3O14649 394 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 TSPAN4O14817 238 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 PSMA7O14818 248 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 AURKAO14965 403 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 KIAA0391O15091 583 aaKnown RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 BUB1O43683 1085 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 AKAP8O43823 692 aaKnown RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 EIF1BO60739 113 aaKnown RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 ZNF780AO75290 641 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 UGT2B17O75795 530 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 UPK1BO75841 260 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 FAM155BO75949 473 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 SEC14L2O76054 403 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 IL18RAPO95256 599 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 CTDNEP1O95476 244 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 TTC4O95801 387 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 GOT2P00505 430 aaKnown RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 IGLV1-40P01703 118 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 SERPINA5P05154 406 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 PRKCBP05771 671 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 URODP06132 367 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 SERPINA6P08185 405 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 PLEKP08567 350 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 CYP21A2P08686 494 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 KRT19P08727 400 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 CLUP10909 449 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 MBL2P11226 248 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 COX4I1P13073 169 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 YBX3P16989 372 aaKnown RBP eCLIP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 ZNF30P17039 623 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 ZP3P21754 424 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 NR4A1P22736 598 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 GCAP28676 217 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 CCND2P30279 289 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 CHRNA5P30532 468 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 FOXN2P32314 431 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 ACSL1P33121 698 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms