RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 LONRF2Q1L5Z9 754 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 TDRD12Q587J7 1177 aaKnown RBP9.65□□□□□ -0.86
CHFR-220ENST00000541817 LYPLAL1Q5VWZ2 237 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 LCN10Q6JVE6 187 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 ZNF783Q6ZMS7 281 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 BNC2Q6ZN30 1099 aaPredicted RBP9.65□□□□□ -0.86
CHFR-220ENST00000541817 TRIM74Q86UV6 250 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 PPP1R3BQ86XI6 285 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 CAMK1DQ8IU85 385 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 ARHGEF19Q8IW93 802 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 SFRP1Q8N474 314 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 CPXM1Q96SM3 734 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 RHOXF2Q9BQY4 288 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 GPR87Q9BY21 358 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 ZYG11BQ9C0D3 744 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 ANKZF1Q9H8Y5 726 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 METTL14Q9HCE5 456 aaKnown RBP9.65□□□□□ -0.86
CHFR-220ENST00000541817 CHST11Q9NPF2 352 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 AGPAT4Q9NRZ5 378 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 SEMA3GQ9NS98 782 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 TRIM10Q9UDY6 481 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 COQ4Q9Y3A0 265 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 PRKAB1Q9Y478 270 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 JRKLQ9Y4A0 524 aa9.65□□□□□ -0.86
CHFR-220ENST00000541817 MACROD2A1Z1Q3 448 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 TMEM200CA6NKL6 621 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 PJA2O43164 708 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 HSF2BPO75031 334 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 RASSF9O75901 435 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 MT-ND3P03897 115 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 ATP1A1P05023 1023 aaKnown RBP9.64□□□□□ -0.87
CHFR-220ENST00000541817 STSP08842 583 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 ELFN1P0C7U0 828 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 FGF5P12034 268 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 CAPN3P20807 821 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 KIR3DL1P43629 444 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 DEUP1Q05D60 604 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 ENPEPQ07075 957 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 PDCLQ13371 301 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 ATP1A4Q13733 1029 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 IL11RAQ14626 422 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 KCNAB1Q14722 419 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 TERF2Q15554 542 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 ASIC2Q16515 512 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 NFIL3Q16649 462 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 CFAP58Q5T655 872 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 VWA5B1Q5TIE3 1220 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 TAOK1Q7L7X3 1001 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 HPS6Q86YV9 775 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 PASD1Q8IV76 773 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 TRIM59Q8IWR1 403 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 WDTC1Q8N5D0 677 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 RNF10Q8N5U6 811 aaKnown RBP9.64□□□□□ -0.87
CHFR-220ENST00000541817 ZBTB2Q8N680 514 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 ARFGAP1Q8N6T3 406 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 STK32AQ8WU08 396 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 MR1Q95460 341 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 OR2M4Q96R27 311 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 TBCBQ99426 244 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 NPY6RQ99463 290 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 LACRTQ9GZZ8 138 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 PHPT1Q9NRX4 125 aaPredicted RBP9.64□□□□□ -0.87
CHFR-220ENST00000541817 LHX3Q9UBR4 397 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 HPCAL4Q9UM19 191 aa9.64□□□□□ -0.87
CHFR-220ENST00000541817 PCYT1BQ9Y5K3 369 aaPredicted RBP9.64□□□□□ -0.87
CHFR-220ENST00000541817 PRRC2AP48634 2157 aaKnown RBP9.64□□□□□ -0.87
CHFR-220ENST00000541817 PDE2AO00408 941 aaPredicted RBP9.63□□□□□ -0.87
CHFR-220ENST00000541817 KCNN4O15554 427 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 SNX2O60749 519 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 DAB1O75553 588 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 ERBB2P04626 1255 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 EPB41P11171 864 aaKnown RBP9.63□□□□□ -0.87
CHFR-220ENST00000541817 KRT5P13647 590 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 TCP1P17987 556 aaKnown RBP9.63□□□□□ -0.87
CHFR-220ENST00000541817 PAFAH1B1P43034 410 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 NAP1L1P55209 391 aaKnown RBP9.63□□□□□ -0.87
CHFR-220ENST00000541817 CDK3Q00526 305 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 Q0VFX4 171 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 CYTH1Q15438 398 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 CDSNQ15517 529 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 HIF1AQ16665 826 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 RAB6CQ53S08 254 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 BRMS1LQ5PSV4 323 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 RWDD4Q6NW29 188 aaKnown RBP9.63□□□□□ -0.87
CHFR-220ENST00000541817 WDR93Q6P2C0 686 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 CERS6Q6ZMG9 384 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 FAM92BQ6ZTR7 304 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 PRIMA1Q86XR5 153 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 PLXDC1Q8IUK5 500 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 ENDOVQ8N8Q3 282 aaKnown RBP9.63□□□□□ -0.87
CHFR-220ENST00000541817 SEC14L1Q92503 715 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 NRGNQ92686 78 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 NUS1Q96E22 293 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 CCDC120Q96HB5 630 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 CAPZA3Q96KX2 299 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 NT5C1BQ96P26 610 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 TRAPPC9Q96Q05 1148 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 MLPHQ9BV36 600 aaPredicted RBP9.63□□□□□ -0.87
CHFR-220ENST00000541817 TEX101Q9BY14 249 aa9.63□□□□□ -0.87
CHFR-220ENST00000541817 FUT8Q9BYC5 575 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms