RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 ATP6AP2O75787 350 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 LATS1O95835 1130 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 TSPAN8P19075 237 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 CR2P20023 1033 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 MZF1P28698 734 aaPredicted RBP17.05■□□□□ 0.32
SPIDR-227ENST00000541342 ARSDP51689 593 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 CDH15P55291 814 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 FPGSQ05932 587 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 ADRM1Q16186 407 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 FAM45BPQ6NSW5 357 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 TMEM207Q6UWW9 146 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 LARP4Q71RC2 724 aaKnown RBP eCLIP17.05■□□□□ 0.322e-6■■■■■ 38.7
SPIDR-227ENST00000541342 CARNMT1Q8N4J0 409 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 FAM45AQ8TCE6 357 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 TCF25Q9BQ70 676 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 CAAP1Q9H8G2 361 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 MTCL1Q9Y4B5 1905 aaKnown RBP17.05■□□□□ 0.32
SPIDR-227ENST00000541342 hCG_2014768A0A024R1R8 64 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 ZNF839A8K0R7 811 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 PAPSS2O95340 614 aaPredicted RBP17.05■□□□□ 0.32
SPIDR-227ENST00000541342 LRG1P02750 347 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 SERPINF2P08697 491 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 GNAO1P09471 354 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 EN2P19622 333 aaPredicted RBP17.05■□□□□ 0.32
SPIDR-227ENST00000541342 SLC7A2P52569 658 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 NEPROQ6NW34 567 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 LINGO4Q6UY18 593 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 BHMTQ93088 406 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 UBXN10Q96LJ8 280 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 NRP2O60462 931 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 CDK9P50750 372 aaKnown RBP17.04■□□□□ 0.32
SPIDR-227ENST00000541342 CTBSQ01459 385 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 KREMEN2Q8NCW0 462 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 SLC22A17Q8WUG5 538 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 CANT1Q8WVQ1 401 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 ARL5AQ9Y689 179 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 A0A1W2PRU2 124 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 PIRTP0C851 137 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 CCDC166P0CW27 439 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 SCNN1BP51168 640 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 PTPRCAPQ14761 206 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 KLC3Q6P597 504 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 FAM217AQ8IXS0 508 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 FAR2Q96K12 515 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 PNPLA3Q9NST1 481 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 MYRFQ9Y2G1 1151 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 H0Y626 953 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 WISP3O95389 354 aaPredicted RBP17.04■□□□□ 0.32
SPIDR-227ENST00000541342 EPOP01588 193 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 ADH1AP07327 375 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 HLA-DPA1P20036 260 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 PRKCQQ04759 706 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 MAPRE2Q15555 327 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 FAM83EQ2M2I3 478 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 SPRED2Q7Z698 418 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 EPHX4Q8IUS5 362 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 BBS5Q8N3I7 341 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 SP7Q8TDD2 431 aaPredicted RBP17.04■□□□□ 0.32
SPIDR-227ENST00000541342 TFAP2CQ92754 450 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 HAUS8Q9BT25 410 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 SLC25A23Q9BV35 468 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 MRPL40Q9NQ50 206 aaKnown RBP17.04■□□□□ 0.32
SPIDR-227ENST00000541342 TRAF6Q9Y4K3 522 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 OR51B4Q9Y5P0 310 aa17.04■□□□□ 0.32
SPIDR-227ENST00000541342 FGF1P05230 155 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 CKMP06732 381 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 SLC14A2Q15849 920 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 UGT3A2Q3SY77 523 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 PPP4R4Q6NUP7 873 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 TRIML2Q8N7C3 387 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 ANKFN1Q8N957 763 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 RIN3Q8TB24 985 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 BLOC1S5Q8TDH9 187 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 MRPS31Q92665 395 aaKnown RBP17.03■□□□□ 0.32
SPIDR-227ENST00000541342 FEM1AQ9BSK4 669 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 CROTQ9UKG9 612 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 HELZP42694 1942 aaKnown RBP17.03■□□□□ 0.32
SPIDR-227ENST00000541342 OR51F1A6NGY5 319 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 CCL16O15467 120 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 INSIG1O15503 277 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 BMP2P12643 396 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 UGT1A6P19224 532 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 SAMD4BQ5PRF9 694 aaKnown RBP17.03■□□□□ 0.32
SPIDR-227ENST00000541342 PLPP4Q5VZY2 271 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 HACD2Q6Y1H2 254 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 ERI1Q8IV48 349 aaKnown RBP17.03■□□□□ 0.32
SPIDR-227ENST00000541342 HJURPQ8NCD3 748 aaPredicted RBP17.03■□□□□ 0.32
SPIDR-227ENST00000541342 HDAC10Q969S8 669 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 RMND5BQ96G75 393 aaPredicted RBP17.03■□□□□ 0.32
SPIDR-227ENST00000541342 GPATCH1Q9BRR8 931 aaKnown RBP17.03■□□□□ 0.32
SPIDR-227ENST00000541342 HCFC1R1Q9NWW0 138 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 MAP10Q9P2G4 905 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 PTGDR2Q9Y5Y4 395 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 LTA4HP09960 611 aaKnown RBP17.03■□□□□ 0.32
SPIDR-227ENST00000541342 GPX3P22352 226 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 CCR2P41597 374 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 GRIA3P42263 894 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 LEPRP48357 1165 aaKnown RBP17.03■□□□□ 0.32
SPIDR-227ENST00000541342 SLC12A2P55011 1212 aa17.03■□□□□ 0.32
SPIDR-227ENST00000541342 CDKN2DP55273 166 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms