RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 TEX264Q9Y6I9 313 aa17.35■□□□□ 0.37
CLSTN3-210ENST00000540931 SDK1Q7Z5N4 2213 aa17.35■□□□□ 0.37
CLSTN3-210ENST00000540931 A0A1B0GTQ1 180 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 PRSS38A1L453 326 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 DCDC2BA2VCK2 349 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 GOLGA8CPA6NN73 597 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 FADS2P1A8MWK0 482 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 K7ESM1 405 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 CDK14O94921 469 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 ALPPL2P10696 532 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 ZNF7P17097 686 aaPredicted RBP17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 OGNP20774 298 aaKnown RBP17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 ACRV1P26436 265 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 PMLP29590 882 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 LIMK1P53667 647 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 TMPRSS15P98073 1019 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 TMEM115Q12893 351 aaPredicted RBP17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 FNBP1LQ5T0N5 605 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 LVRNQ6Q4G3 990 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 RFLNAQ6ZTI6 216 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 GALNT13Q8IUC8 556 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 RELL1Q8IUW5 271 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 PALM2Q8IXS6 379 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 SLC22A18ASQ8N1D0 253 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 UBXN4Q92575 508 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 ZNF669Q96BR6 464 aaPredicted RBP17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 FMO2Q99518 471 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 EDEM2Q9BV94 578 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 DUSP23Q9BVJ7 150 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 ZDHHC3Q9NYG2 299 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 NCKIPSDQ9NZQ3 722 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 DMGDHQ9UI17 866 aaKnown RBP17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 CNOT6Q9ULM6 557 aaKnown RBP17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 CA5BQ9Y2D0 317 aa17.34■□□□□ 0.37
CLSTN3-210ENST00000540931 SCN8AQ9UQD0 1980 aa17.33■□□□□ 0.37
CLSTN3-210ENST00000540931 ZNF106Q9H2Y7 1883 aaKnown RBP17.33■□□□□ 0.37
CLSTN3-210ENST00000540931 LNP1A1A4G5 178 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 PATE3B3GLJ2 98 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 GAPDHSO14556 408 aaPredicted RBP17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 KMOO15229 486 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 INPP4BO15327 924 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 TP73O15350 636 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 CD3EAPO15446 510 aaKnown RBP17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 NUAK1O60285 661 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 VAPBO95292 243 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 GOT2P00505 430 aaKnown RBP17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 CEACAM5P06731 702 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 JUNDP17535 347 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 NMBRP28336 390 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 AKT1P31749 480 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 ELK3P41970 407 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 CRADDP78560 199 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 ILF3Q12906 894 aaKnown RBP eCLIP17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 TEX35Q5T0J7 233 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 GPRC6AQ5T6X5 926 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 PACS1Q6VY07 963 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 KIAA0408Q6ZU52 694 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 GKN2Q86XP6 184 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 SPATS2Q86XZ4 545 aaKnown RBP17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 ZBED8Q8IZ13 594 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 PHACTR4Q8IZ21 702 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 RBFAQ8N0V3 343 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 MINDY1Q8N5J2 469 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 IFT81Q8WYA0 676 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 CDKL2Q92772 493 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 MFSD3Q96ES6 412 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 AGAP2Q99490 1192 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 GTPBP2Q9BX10 602 aaKnown RBP17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 GSDMCQ9BYG8 508 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 APOBEC3BQ9UH17 382 aaKnown RBP17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 DOCK9Q9BZ29 2069 aa17.33■□□□□ 0.36
CLSTN3-210ENST00000540931 CCDC162PA2VCL2 907 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 H3BMM5 538 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 TPP1O14773 563 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 CHUKO15111 745 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 SLC2A4P14672 509 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 TNFRSF8P28908 595 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 FOXN2P32314 431 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 PHBP35232 272 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 ADARP55265 1226 aaKnown RBP17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 MRPS25P82663 173 aaKnown RBP17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 PLOD1Q02809 727 aaPredicted RBP17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 CRYMQ14894 314 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 STEAP4Q687X5 459 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 NEPROQ6NW34 567 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 LRRTM4Q86VH4 590 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 SERPINA9Q86WD7 417 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 HID1Q8IV36 788 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 OTUD6BQ8N6M0 293 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 FBXO36Q8NEA4 188 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 GSDMBQ8TAX9 411 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 ZNF778Q96MU6 729 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 LGR4Q9BXB1 951 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 TM7SF3Q9NS93 570 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 ZDHHC18Q9NUE0 388 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 INTS10Q9NVR2 710 aaKnown RBP17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 MOSPD1Q9UJG1 213 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 COMMD10Q9Y6G5 202 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 SLCO1B1Q9Y6L6 691 aa17.32■□□□□ 0.36
CLSTN3-210ENST00000540931 IGLV3-16A0A075B6K0 115 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms