RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 PRLP01236 227 aa16.94■□□□□ 0.3
EPB41L3-204ENST00000540638 CCNHP51946 323 aaPredicted RBP16.94■□□□□ 0.3
EPB41L3-204ENST00000540638 MBOAT1Q6ZNC8 495 aa16.94■□□□□ 0.3
EPB41L3-204ENST00000540638 KBTBD6Q86V97 674 aa16.94■□□□□ 0.3
EPB41L3-204ENST00000540638 PPM1MQ96MI6 270 aa16.94■□□□□ 0.3
EPB41L3-204ENST00000540638 C2orf49Q9BVC5 232 aaPredicted RBP16.94■□□□□ 0.3
EPB41L3-204ENST00000540638 ZNF334Q9HCZ1 680 aaPredicted RBP16.94■□□□□ 0.3
EPB41L3-204ENST00000540638 FNIP2Q9P278 1114 aa16.94■□□□□ 0.3
EPB41L3-204ENST00000540638 POLG2Q9UHN1 485 aa16.94■□□□□ 0.3
EPB41L3-204ENST00000540638 FBP2O00757 339 aa16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 PRMT5O14744 637 aaPredicted RBP16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 CAPN1P07384 714 aa16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 SLC2A4P14672 509 aa16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 CSF2RAP15509 400 aa16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 DDX39BQ13838 428 aaKnown RBP16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 TBCELQ5QJ74 424 aa16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 PDSS2Q86YH6 399 aa16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 NMD3Q96D46 503 aaKnown RBP16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 VN1R3Q9BXE9 311 aa16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 NSUN3Q9H649 340 aaKnown RBP16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 KLQ9UEF7 1012 aa16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 KRT87PA6NCN2 255 aa16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 UGT2B4P06133 528 aa16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 ITGALP20701 1170 aa16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 UFM1P61960 85 aa16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 TRIM25Q14258 630 aaKnown RBP16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 GPRIN3Q6ZVF9 776 aa16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 TSPAN33Q86UF1 283 aa16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 CACUL1Q86Y37 369 aa16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 NKAPQ8N5F7 415 aaKnown RBP16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 PXYLP1Q8TE99 480 aa16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 CANT1Q8WVQ1 401 aa16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 ELAC1Q9H777 363 aaKnown RBP16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 ABCB8Q9NUT2 735 aa16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 ZNF711Q9Y462 761 aa16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 BPTFQ12830 3046 aa16.93■□□□□ 0.3
EPB41L3-204ENST00000540638 A0A1W2PQ67 120 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 TEX28O15482 410 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 EPOP01588 193 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 MTHFD2P13995 350 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 OGNP20774 298 aaKnown RBP16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 VEGFBP49765 207 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 SMARCB1Q12824 385 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 FIBCD1Q8N539 461 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 OR56A4Q8NGH8 313 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 PBXIP1Q96AQ6 731 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 TRMOQ9BU70 441 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 MYO16Q9Y6X6 1858 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 IGLV3-27P01718 113 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 PCNAP12004 261 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 CPSF6Q16630 551 aaKnown RBP eCLIP16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 SLC8B1Q6J4K2 584 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 SYVN1Q86TM6 617 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 HJURPQ8NCD3 748 aaPredicted RBP16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 FUBP1Q96AE4 644 aaKnown RBP16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 PLD4Q96BZ4 506 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 TRIM4Q9C037 500 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 MEAF6Q9HAF1 191 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 PDFQ9HBH1 243 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 PCDHGA7Q9Y5G6 932 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 SLC4A7Q9Y6M7 1214 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 C15orf38-AP3S2A0A0A6YYH1 394 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 CCDC154A6NI56 674 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 KERAO60938 352 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 ZNF7P17097 686 aaPredicted RBP16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 XPAP23025 273 aaPredicted RBP16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 ZNF140P52738 457 aaPredicted RBP16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 ATP6AP1LQ52LC2 224 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 CXorf57Q6NSI4 855 aaKnown RBP16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 ZBTB49Q6ZSB9 765 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 ARPINQ7Z6K5 226 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 FAM110BQ8TC76 370 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 GFM2Q969S9 779 aaKnown RBP16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 KIAA1191Q96A73 305 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 PYCR2Q96C36 320 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 INSL5Q9Y5Q6 135 aa16.92■□□□□ 0.3
EPB41L3-204ENST00000540638 FAM92AA1XBS5 289 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 NEDD8-MDP1E9PL57 170 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 PDLIM1O00151 329 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 CAPN3P20807 821 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 NFKBIAP25963 317 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 CTSOP43234 321 aaPredicted RBP16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 HMGCS1Q01581 520 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 CYP51A1Q16850 503 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 SAMD4BQ5PRF9 694 aaKnown RBP16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 LILRA2Q8N149 483 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 SPDYE1Q8NFV5 336 aaPredicted RBP16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 ZNF599Q96NL3 588 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 ATOH8Q96SQ7 321 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 TBCDQ9BTW9 1192 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 GRIP2Q9C0E4 1043 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 TFB2MQ9H5Q4 396 aaKnown RBP16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 NUP214P35658 2090 aaPredicted RBP16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 H3BNX3 289 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 CYBBP04839 570 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 RGS4P49798 205 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 HTR6P50406 440 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 DGKQP52824 942 aa16.91■□□□□ 0.3
EPB41L3-204ENST00000540638 CBX2Q14781 532 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms