RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 TMEM74Q96NL1 305 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 POLR1EQ9GZS1 481 aaKnown RBP12.2□□□□□ -0.46
NPC1-202ENST00000540608 PAIP1Q9H074 479 aaKnown RBP12.2□□□□□ -0.46
NPC1-202ENST00000540608 TBC1D23Q9NUY8 699 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 TAS2R13Q9NYV9 303 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 SLAMF8Q9P0V8 285 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 IKZF3Q9UKT9 509 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 DOCK4Q8N1I0 1966 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 A0A1W2PPW3 197 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 SYCE1LA8MT33 242 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 STX16O14662 325 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 GPR182O15218 404 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 ZSCAN9O15535 394 aaPredicted RBP12.19□□□□□ -0.46
NPC1-202ENST00000540608 FOXD2O60548 495 aaPredicted RBP12.19□□□□□ -0.46
NPC1-202ENST00000540608 ESRRBO95718 433 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 CHEK2O96017 543 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 IGHA2P01877 340 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 TYMPP19971 482 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 HRH2P25021 359 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 RAD51Q06609 339 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 MGAT3Q09327 533 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 SERINC3Q13530 473 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 PLCL1Q15111 1095 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 FGD3Q5JSP0 725 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 AARS2Q5JTZ9 985 aaKnown RBP12.19□□□□□ -0.46
NPC1-202ENST00000540608 FAM117BQ6P1L5 589 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 SYVN1Q86TM6 617 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 RIMKLAQ8IXN7 391 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 KLHL23Q8NBE8 558 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 BPIFB1Q8TDL5 484 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 GIPC3Q8TF64 312 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 IGSF8Q969P0 613 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 CDKN2AIPNLQ96HQ2 116 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 VPS50Q96JG6 964 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 SUSD3Q96L08 255 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 SOX17Q9H6I2 414 aaPredicted RBP12.19□□□□□ -0.46
NPC1-202ENST00000540608 PFDN4Q9NQP4 134 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 ZIM2Q9NZV7 527 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 IFT80Q9P2H3 777 aaPredicted RBP12.19□□□□□ -0.46
NPC1-202ENST00000540608 PADI3Q9ULW8 664 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 MED16Q9Y2X0 877 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 FAM234BA2RU67 622 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 KLK8O60259 260 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 SNX2O60749 519 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 RAMP2O60895 175 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 CPNE6O95741 557 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 MLYCDO95822 493 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 C1RP00736 705 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 ENO2P09104 434 aaPredicted RBP12.19□□□□□ -0.46
NPC1-202ENST00000540608 INHBBP09529 407 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 OR4Q2P0C623 313 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 AKR1A1P14550 325 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 PRDX3P30048 256 aaKnown RBP12.19□□□□□ -0.46
NPC1-202ENST00000540608 FMO4P31512 558 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 ERVK-8P63133 956 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 TUSC3Q13454 348 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 GALNT3Q14435 633 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 TAF1CQ15572 869 aaPredicted RBP12.19□□□□□ -0.46
NPC1-202ENST00000540608 TSNQ15631 228 aaKnown RBP12.19□□□□□ -0.46
NPC1-202ENST00000540608 PARP15Q460N3 678 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 ANKDD1AQ495B1 522 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 FBXL22Q6P050 247 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 TXNDC11Q6PKC3 985 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 SERINC5Q86VE9 423 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 CPNE9Q8IYJ1 553 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 ATP6V0D2Q8N8Y2 350 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 FUBP1Q96AE4 644 aaKnown RBP12.19□□□□□ -0.46
NPC1-202ENST00000540608 SEPHS2Q99611 448 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 MTG1Q9BT17 334 aaPredicted RBP12.19□□□□□ -0.46
NPC1-202ENST00000540608 FAM50BQ9Y247 325 aa12.19□□□□□ -0.46
NPC1-202ENST00000540608 DRGXA6NNA5 263 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 H0Y858 1186 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 CBFA2T3O75081 653 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 SOAT2O75908 522 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 PRSS56P0CW18 603 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 JUNBP17275 347 aaPredicted RBP12.18□□□□□ -0.46
NPC1-202ENST00000540608 CES1P23141 567 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 SOX11P35716 441 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 CASP2P42575 452 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 FBXO48Q5FWF7 155 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 ACBD5Q5T8D3 534 aaPredicted RBP12.18□□□□□ -0.46
NPC1-202ENST00000540608 ZNF773Q6PK81 442 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 HID1Q8IV36 788 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 ISG20Q96AZ6 181 aaKnown RBP12.18□□□□□ -0.46
NPC1-202ENST00000540608 RNF145Q96MT1 663 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 HGH1Q9BTY7 390 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 LRRC3Q9BY71 257 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 NAA50Q9GZZ1 169 aaKnown RBP12.18□□□□□ -0.46
NPC1-202ENST00000540608 TLR9Q9NR96 1032 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 INTS7Q9NVH2 962 aaKnown RBP12.18□□□□□ -0.46
NPC1-202ENST00000540608 GMIPQ9P107 970 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 SUN2Q9UH99 717 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 ZNF225Q9UK10 706 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 USP22Q9UPT9 525 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 TDRKHQ9Y2W6 561 aaKnown RBP12.18□□□□□ -0.46
NPC1-202ENST00000540608 PCDHB3Q9Y5E6 796 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 UBA6A0AVT1 1052 aaPredicted RBP12.18□□□□□ -0.46
NPC1-202ENST00000540608 GRXCR2A6NFK2 248 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 CDC7O00311 574 aa12.18□□□□□ -0.46
NPC1-202ENST00000540608 MUSKO15146 869 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms