RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 KLHL3Q9UH77 587 aa11.85□□□□□ -0.51
CBX3P4-202ENST00000540428 KCTD3Q9Y597 815 aa11.85□□□□□ -0.51
CBX3P4-202ENST00000540428 RPS6KL1Q9Y6S9 549 aa11.85□□□□□ -0.51
CBX3P4-202ENST00000540428 ZNF487B1APH4 448 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 UBXN7O94888 489 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 VIPP01282 170 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 JCHAINP01591 159 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 PRKAR1AP10644 381 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 GJC1P36383 396 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 PBX1P40424 430 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 PPIDQ08752 370 aaKnown RBP11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 SLC10A2Q12908 348 aaPredicted RBP11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 UBAP2LQ14157 1087 aaKnown RBP11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 IL11RAQ14626 422 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 IQCB1Q15051 598 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 NFKBIBQ15653 356 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 DEFB109BQ30KR1 87 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 TMC3Q7Z5M5 1100 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 RBM12BQ8IXT5 1001 aaKnown RBP11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 CNTD1Q8N815 330 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 CCNYQ8ND76 341 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 EID2BQ96D98 161 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 ABHD17AQ96GS6 310 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 TIMM29Q9BSF4 260 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 SPATA16Q9BXB7 569 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 ULBP3Q9BZM4 244 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 OR2AG1Q9H205 316 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 ZNF768Q9H5H4 540 aaKnown RBP11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 MAGEE1Q9HCI5 957 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 POT1Q9NUX5 634 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 OGFRQ9NZT2 677 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 ANKMY1Q9P2S6 941 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 CAPN11Q9UMQ6 739 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 PCDHB3Q9Y5E6 796 aa11.84□□□□□ -0.51
CBX3P4-202ENST00000540428 GOLGA6L3A6NEY3 463 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 PRR19A6NJB7 356 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 KCNK1O00180 336 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 KMOO15229 486 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 VEGFDO43915 354 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 H2AFZP0C0S5 128 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 SLC19A1P41440 591 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 GFERP55789 205 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 TAS2R40P59535 323 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 FOXM1Q08050 763 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 SLC14A2Q15849 920 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 INSCQ1MX18 579 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 LACTB2Q53H82 288 aaPredicted RBP11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 CYB5D1Q6P9G0 228 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 ABRAXAS1Q6UWZ7 409 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 C6orf15Q6UXA7 325 aaPredicted RBP11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 WASH2PQ6VEQ5 465 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 H2AFVQ71UI9 128 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 PRSS42Q7Z5A4 293 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 ADGRG6Q86SQ4 1221 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 LRRTM4Q86VH4 590 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 VSIG1Q86XK7 387 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 TRIM48Q8IWZ4 208 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 GPR26Q8NDV2 337 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 GLYATL1Q969I3 302 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 RNF157Q96PX1 679 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 TRIB3Q96RU7 358 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 SRPK1Q96SB4 655 aaKnown RBP11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 XPO4Q9C0E2 1151 aaKnown RBP11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 OSGEPL1Q9H4B0 414 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 WASH6PQ9NQA3 447 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 ZNF71Q9NQZ8 489 aaPredicted RBP11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 SCHIP1Q9P0W5 487 aaPredicted RBP11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 CTTNBP2NLQ9P2B4 639 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 ZNF624Q9P2J8 865 aaPredicted RBP11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 EPHA6Q9UF33 1036 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 NENFQ9UMX5 172 aa11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 LUC7L2Q9Y383 392 aaKnown RBP11.83□□□□□ -0.52
CBX3P4-202ENST00000540428 PTPN13Q12923 2485 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 NAV2Q8IVL1 2488 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 CLEC18AA5D8T8 446 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 PDZK1P1A8MUH7 402 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 RECKO95980 971 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 ZNF28P17035 718 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 ZNF7P17097 686 aaPredicted RBP11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 AMD1P17707 334 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 KDELR1P24390 212 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 DLSTP36957 453 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 CAPZBP47756 277 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 TPM4P67936 248 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 FANCCQ00597 558 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 KLRB1Q12918 225 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 ZBTB17Q13105 803 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 GALNT3Q14435 633 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 AGAP9Q5VTM2 703 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 ALS2CLQ60I27 953 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 TCTN3Q6NUS6 607 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 C16orf46Q6P387 395 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 CRTC3Q6UUV7 619 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 CLEC18BQ6UXF7 455 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 NT5DC3Q86UY8 548 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 CPNE8Q86YQ8 564 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 PLD5Q8N7P1 536 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 CLEC18CQ8NCF0 446 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 LRRN4Q8WUT4 740 aa11.82□□□□□ -0.52
CBX3P4-202ENST00000540428 KLHL6Q8WZ60 621 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms