RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 TRIM55Q9BYV6 548 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 PCDH12Q9NPG4 1184 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 XPR1Q9UBH6 696 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 PPM1HQ9ULR3 514 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 A8MX80 341 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 TMEM114B3SHH9 223 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 H3BMM5 538 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 SBK3P0C264 359 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 ACRV1P26436 265 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 GLRBP48167 497 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 ITGA9Q13797 1035 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 CHRNA6Q15825 494 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 TECRLQ5HYJ1 363 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 CTSL3PQ5NE16 218 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 UGT3A1Q6NUS8 523 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 TMEM207Q6UWW9 146 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 TTC7BQ86TV6 843 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 PIM3Q86V86 326 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 CRLF3Q8IUI8 442 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 CCDC126Q96EE4 140 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 PPP1R16AQ96I34 528 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 RPP25Q9BUL9 199 aaKnown RBP16.75■□□□□ 0.27
COPS3-212ENST00000539941 CRLS1Q9UJA2 301 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 MED16Q9Y2X0 877 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 BRWD1Q9NSI6 2320 aa16.74■□□□□ 0.27
COPS3-212ENST00000539941 PSMD11O00231 422 aa16.74■□□□□ 0.27
COPS3-212ENST00000539941 KPNA3O00505 521 aaPredicted RBP16.74■□□□□ 0.27
COPS3-212ENST00000539941 OR1I1O60431 355 aa16.74■□□□□ 0.27
COPS3-212ENST00000539941 DNAJC6O75061 913 aa16.74■□□□□ 0.27
COPS3-212ENST00000539941 HLA-EP13747 358 aa16.74■□□□□ 0.27
COPS3-212ENST00000539941 HNRNPLP14866 589 aaKnown RBP eCLIP16.74■□□□□ 0.27
COPS3-212ENST00000539941 MMP12P39900 470 aa16.74■□□□□ 0.27
COPS3-212ENST00000539941 TNFRSF4P43489 277 aa16.74■□□□□ 0.27
COPS3-212ENST00000539941 DYNC1I2Q13409 638 aaKnown RBP16.74■□□□□ 0.27
COPS3-212ENST00000539941 LIPMQ5VYY2 423 aa16.74■□□□□ 0.27
COPS3-212ENST00000539941 NXPE1Q8N323 547 aa16.74■□□□□ 0.27
COPS3-212ENST00000539941 NKAPQ8N5F7 415 aaKnown RBP16.74■□□□□ 0.27
COPS3-212ENST00000539941 CSGALNACT1Q8TDX6 532 aa16.74■□□□□ 0.27
COPS3-212ENST00000539941 ANKRD49Q8WVL7 239 aa16.74■□□□□ 0.27
COPS3-212ENST00000539941 CLPBQ9H078 707 aa16.74■□□□□ 0.27
COPS3-212ENST00000539941 TCF20Q9UGU0 1960 aaKnown RBP16.74■□□□□ 0.27
COPS3-212ENST00000539941 SKAP2O75563 359 aaPredicted RBP16.73■□□□□ 0.27
COPS3-212ENST00000539941 ATP5F1P24539 256 aaPredicted RBP16.73■□□□□ 0.27
COPS3-212ENST00000539941 IL12RB1P42701 662 aa16.73■□□□□ 0.27
COPS3-212ENST00000539941 SLC1A6P48664 564 aa16.73■□□□□ 0.27
COPS3-212ENST00000539941 ATP6V0D1P61421 351 aa16.73■□□□□ 0.27
COPS3-212ENST00000539941 PFKPQ01813 784 aa16.73■□□□□ 0.27
COPS3-212ENST00000539941 ENPP2Q13822 863 aa16.73■□□□□ 0.27
COPS3-212ENST00000539941 AAK1Q2M2I8 961 aa16.73■□□□□ 0.27
COPS3-212ENST00000539941 CES4AQ5XG92 561 aa16.73■□□□□ 0.27
COPS3-212ENST00000539941 ZCCHC23Q6ZST2 131 aa16.73■□□□□ 0.27
COPS3-212ENST00000539941 PARS2Q7L3T8 475 aaKnown RBP16.73■□□□□ 0.27
COPS3-212ENST00000539941 SFTPA1Q8IWL2 248 aa16.73■□□□□ 0.27
COPS3-212ENST00000539941 GALNT15Q8N3T1 639 aa16.73■□□□□ 0.27
COPS3-212ENST00000539941 PIP4K2CQ8TBX8 421 aa16.73■□□□□ 0.27
COPS3-212ENST00000539941 ZNF570Q96NI8 536 aa16.73■□□□□ 0.27
COPS3-212ENST00000539941 SIKE1Q9BRV8 207 aa16.73■□□□□ 0.27
COPS3-212ENST00000539941 DERL2Q9GZP9 239 aa16.73■□□□□ 0.27
COPS3-212ENST00000539941 PAPOLBQ9NRJ5 636 aaKnown RBP16.73■□□□□ 0.27
COPS3-212ENST00000539941 IRAK4Q9NWZ3 460 aa16.73■□□□□ 0.27
COPS3-212ENST00000539941 TRMT6Q9UJA5 497 aaKnown RBP16.73■□□□□ 0.27
COPS3-212ENST00000539941 GNPTGQ9UJJ9 305 aa16.73■□□□□ 0.27
COPS3-212ENST00000539941 USH1CQ9Y6N9 552 aa16.73■□□□□ 0.27
COPS3-212ENST00000539941 C1QTNF3-AMACRE9PGA6 284 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 F8W8V4 182 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 H0Y858 1186 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 NQO1P15559 274 aaKnown RBP16.72■□□□□ 0.27
COPS3-212ENST00000539941 CD1DP15813 335 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 DNAJB13P59910 316 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 SEMG2Q02383 582 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 ELP6Q0PNE2 266 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 RALGDSQ12967 914 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 SETMARQ53H47 684 aaPredicted RBP16.72■□□□□ 0.27
COPS3-212ENST00000539941 LRRC73Q5JTD7 316 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 SPATA6LQ8N4H0 392 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 RHEBL1Q8TAI7 183 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 PPP4R1Q8TF05 950 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 C10orf82Q8WW14 230 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 FAM129BQ96TA1 746 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 GPR21Q99679 349 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 P2RY13Q9BPV8 354 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 TFB2MQ9H5Q4 396 aaKnown RBP16.72■□□□□ 0.27
COPS3-212ENST00000539941 NPHS2Q9NP85 383 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 TRPV5Q9NQA5 729 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 SMOXQ9NWM0 555 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 CHCHD3Q9NX63 227 aaKnown RBP16.72■□□□□ 0.27
COPS3-212ENST00000539941 ZDHHC3Q9NYG2 299 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 SARDHQ9UL12 918 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 FAM50BQ9Y247 325 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 ENO4A6NNW6 628 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 E5RI56 91 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 GPR39O43194 453 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 DLX3O60479 287 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 TFEBP19484 476 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 SERPINB5P36952 375 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 NSG1P42857 185 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 ABCE1P61221 599 aaKnown RBP16.72■□□□□ 0.27
COPS3-212ENST00000539941 EGFLAMQ63HQ2 1017 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 MACC1Q6ZN28 852 aa16.72■□□□□ 0.27
COPS3-212ENST00000539941 ISCA2Q86U28 154 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms