RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 BEND5Q7L4P6 421 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 B3GNT8Q7Z7M8 397 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 CAMK1DQ8IU85 385 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 EMC1Q8N766 993 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 BAHD1Q8TBE0 780 aaPredicted RBP7.55□□□□□ -1.2
GNE-205ENST00000539815 PLEKHO2Q8TD55 490 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 TMEM168Q9H0V1 697 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 PFDN4Q9NQP4 134 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 NDFIP2Q9NV92 336 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 TRNAU1APQ9NX07 287 aaKnown RBP7.55□□□□□ -1.2
GNE-205ENST00000539815 TAAR2Q9P1P5 351 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 COL4A3Q01955 1670 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 ACTN4O43707 911 aaKnown RBP7.55□□□□□ -1.2
GNE-205ENST00000539815 MGRN1O60291 552 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 DIAPH2O60879 1101 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 SLC25A14O95258 325 aaPredicted RBP7.55□□□□□ -1.2
GNE-205ENST00000539815 CCL4P13236 92 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 CCNB1P14635 433 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 ITGA3P26006 1051 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 ARHGAP25P42331 645 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 LEPRP48357 1165 aaKnown RBP7.55□□□□□ -1.2
GNE-205ENST00000539815 SRSF11Q05519 484 aaKnown RBP7.55□□□□□ -1.2
GNE-205ENST00000539815 CASP8Q14790 479 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 MAN2A1Q16706 1144 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 ALFQ53S48 1182 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 CERCAMQ5T4B2 595 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 RNF220Q5VTB9 566 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 CRTC3Q6UUV7 619 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 SCML4Q8N228 414 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 BEND7Q8N7W2 519 aaPredicted RBP7.55□□□□□ -1.2
GNE-205ENST00000539815 SKA2Q8WVK7 121 aaPredicted RBP7.55□□□□□ -1.2
GNE-205ENST00000539815 KAT5Q92993 513 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 PRICKLE1Q96MT3 831 aaPredicted RBP7.55□□□□□ -1.2
GNE-205ENST00000539815 ZNF641Q96N77 438 aaPredicted RBP7.55□□□□□ -1.2
GNE-205ENST00000539815 FERD3LQ96RJ6 166 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 TTC1Q99614 292 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 RAD18Q9NS91 495 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 ZNF451Q9Y4E5 1061 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 ARID1BQ8NFD5 2236 aaPredicted RBP7.55□□□□□ -1.2
GNE-205ENST00000539815 WDR87Q6ZQQ6 2873 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 IFRD1O00458 451 aaPredicted RBP7.55□□□□□ -1.2
GNE-205ENST00000539815 ZNF185O15231 689 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 SHOX2O60902 331 aaPredicted RBP7.55□□□□□ -1.2
GNE-205ENST00000539815 GAS8O95995 478 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 TIMP2P16035 220 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 ADRA1BP35368 520 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 CAMK4Q16566 473 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 ALS2CLQ60I27 953 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 NADSYN1Q6IA69 706 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 LINC00469Q8N7U9 141 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 CPA5Q8WXQ8 436 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.55□□□□□ -1.2
GNE-205ENST00000539815 SLC35C1Q96A29 364 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 BMFQ96LC9 184 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 FER1L6-AS2Q96M78 137 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 NDEL1Q9GZM8 345 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 NAT10Q9H0A0 1025 aaKnown RBP7.55□□□□□ -1.2
GNE-205ENST00000539815 KCTD10Q9H3F6 313 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 NOD2Q9HC29 1040 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 FAM207AQ9NSI2 230 aaPredicted RBP7.55□□□□□ -1.2
GNE-205ENST00000539815 DKK3Q9UBP4 350 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 SH3BGRL2Q9UJC5 107 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 SNX10Q9Y5X0 201 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 COPG1Q9Y678 874 aaKnown RBP7.55□□□□□ -1.2
GNE-205ENST00000539815 GMEB1Q9Y692 573 aa7.55□□□□□ -1.2
GNE-205ENST00000539815 PKDREJQ9NTG1 2253 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 LRRD1A4D1F6 860 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 TNFRSF10CO14798 259 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 DDAH2O95865 285 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 PRKCGP05129 697 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 PPIDQ08752 370 aaKnown RBP7.54□□□□□ -1.2
GNE-205ENST00000539815 SPRED3Q2MJR0 410 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 CFAP157Q5JU67 520 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 TMEM214Q6NUQ4 689 aaKnown RBP7.54□□□□□ -1.2
GNE-205ENST00000539815 EID3Q8N140 333 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 EXD1Q8NHP7 514 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.54□□□□□ -1.2
GNE-205ENST00000539815 NAA15Q9BXJ9 866 aaKnown RBP7.54□□□□□ -1.2
GNE-205ENST00000539815 SEMA4CQ9C0C4 833 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 DRC3Q9H069 523 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 MRPL46Q9H2W6 279 aaKnown RBP7.54□□□□□ -1.2
GNE-205ENST00000539815 SERTAD3Q9UJW9 196 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 KCNK6Q9Y257 313 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 B3GALT1Q9Y5Z6 326 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 GSAPA4D1B5 854 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 SYF2O95926 243 aaKnown RBP7.54□□□□□ -1.2
GNE-205ENST00000539815 SNRPB2P08579 225 aaKnown RBP7.54□□□□□ -1.2
GNE-205ENST00000539815 COX6B1P14854 86 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 PBLDP30039 288 aaPredicted RBP7.54□□□□□ -1.2
GNE-205ENST00000539815 GPD2P43304 727 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 GNGT1P63211 74 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 DNASE1L3Q13609 305 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 C16orf72Q14CZ0 275 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 TAF5Q15542 800 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 ALG11Q2TAA5 492 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 SH2D4BQ5SQS7 431 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 LIMS2Q7Z4I7 341 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 RAB42Q8N4Z0 105 aa7.54□□□□□ -1.2
GNE-205ENST00000539815 ISG20Q96AZ6 181 aaKnown RBP7.54□□□□□ -1.2
GNE-205ENST00000539815 SLC45A3Q96JT2 553 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms