RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 PHF19Q5T6S3 580 aa16.57■□□□□ 0.24
DDB1-215ENST00000539712 RCBTB1Q8NDN9 531 aa16.57■□□□□ 0.24
DDB1-215ENST00000539712 ACTL9Q8TC94 416 aa16.57■□□□□ 0.24
DDB1-215ENST00000539712 PLEKHG4BQ96PX9 1271 aa16.57■□□□□ 0.24
DDB1-215ENST00000539712 SRPK1Q96SB4 655 aaKnown RBP16.57■□□□□ 0.24
DDB1-215ENST00000539712 OSBPL8Q9BZF1 889 aa16.57■□□□□ 0.24
DDB1-215ENST00000539712 IL26Q9NPH9 171 aa16.57■□□□□ 0.24
DDB1-215ENST00000539712 RAD18Q9NS91 495 aa16.57■□□□□ 0.24
DDB1-215ENST00000539712 IL17CQ9P0M4 197 aa16.57■□□□□ 0.24
DDB1-215ENST00000539712 PDP2Q9P2J9 529 aa16.57■□□□□ 0.24
DDB1-215ENST00000539712 TRHDEQ9UKU6 1024 aa16.57■□□□□ 0.24
DDB1-215ENST00000539712 PRAMEF33A0A0G2JMD5 474 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 GPR89AB7ZAQ6 455 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 GAPDHSO14556 408 aaPredicted RBP16.56■□□□□ 0.24
DDB1-215ENST00000539712 PRAMEF10O60809 474 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 MTX2O75431 263 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 JMJD7P0C870 316 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 GPR89BP0CG08 455 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 PYGMP11217 842 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 ARSDP51689 593 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 VAV2P52735 878 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 UCNP55089 124 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 TMPRSS3P57727 454 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 OTUD4Q01804 1114 aaKnown RBP16.56■□□□□ 0.24
DDB1-215ENST00000539712 TGIF1Q15583 401 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 CCDC70Q6NSX1 233 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 SLC25A41Q8N5S1 370 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 OR4D9Q8NGE8 314 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 DTX3LQ8TDB6 740 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 CCDC97Q96F63 343 aaPredicted RBP16.56■□□□□ 0.24
DDB1-215ENST00000539712 CALR3Q96L12 384 aaKnown RBP16.56■□□□□ 0.24
DDB1-215ENST00000539712 CCDC74BQ96LY2 380 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 VPS35Q96QK1 796 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 CMKLR1Q99788 373 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 TRABDQ9H4I3 376 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 SARS2Q9NP81 518 aaKnown RBP16.56■□□□□ 0.24
DDB1-215ENST00000539712 PRDM8Q9NQV8 689 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 KCNK4Q9NYG8 393 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 FOXJ2Q9P0K8 574 aa16.56■□□□□ 0.24
DDB1-215ENST00000539712 SCHIP1Q9P0W5 487 aaPredicted RBP16.56■□□□□ 0.24
DDB1-215ENST00000539712 HELZ2Q9BYK8 2649 aaKnown RBP16.56■□□□□ 0.24
DDB1-215ENST00000539712 TEX51A0A1B0GUA7 166 aa16.55■□□□□ 0.24
DDB1-215ENST00000539712 ATXN7O15265 892 aaPredicted RBP16.55■□□□□ 0.24
DDB1-215ENST00000539712 AGTP01019 485 aa16.55■□□□□ 0.24
DDB1-215ENST00000539712 THRAP10827 490 aa16.55■□□□□ 0.24
DDB1-215ENST00000539712 FGF3P11487 239 aaPredicted RBP16.55■□□□□ 0.24
DDB1-215ENST00000539712 F3P13726 295 aa16.55■□□□□ 0.24
DDB1-215ENST00000539712 MPSTP25325 297 aa16.55■□□□□ 0.24
DDB1-215ENST00000539712 ADRA1AP35348 466 aa16.55■□□□□ 0.24
DDB1-215ENST00000539712 UBE2IP63279 158 aaKnown RBP16.55■□□□□ 0.24
DDB1-215ENST00000539712 MPP3Q13368 585 aa16.55■□□□□ 0.24
DDB1-215ENST00000539712 MSLNQ13421 630 aaPredicted RBP16.55■□□□□ 0.24
DDB1-215ENST00000539712 COL9A2Q14055 689 aaPredicted RBP16.55■□□□□ 0.24
DDB1-215ENST00000539712 ARHGAP40Q5TG30 622 aa16.55■□□□□ 0.24
DDB1-215ENST00000539712 BROXQ5VW32 411 aa16.55■□□□□ 0.24
DDB1-215ENST00000539712 C11orf96Q7Z7L8 435 aa16.55■□□□□ 0.24
DDB1-215ENST00000539712 JAMLQ86YT9 394 aa16.55■□□□□ 0.24
DDB1-215ENST00000539712 IPMKQ8NFU5 416 aa16.55■□□□□ 0.24
DDB1-215ENST00000539712 USP7Q93009 1102 aa16.55■□□□□ 0.24
DDB1-215ENST00000539712 PMEPA1Q969W9 287 aa16.55■□□□□ 0.24
DDB1-215ENST00000539712 BAG1Q99933 345 aaPredicted RBP16.55■□□□□ 0.24
DDB1-215ENST00000539712 FAM118BQ9BPY3 351 aa16.55■□□□□ 0.24
DDB1-215ENST00000539712 GBA3Q9H227 469 aa16.55■□□□□ 0.24
DDB1-215ENST00000539712 KLC4Q9NSK0 619 aa16.55■□□□□ 0.24
DDB1-215ENST00000539712 TRIM10Q9UDY6 481 aa16.55■□□□□ 0.24
DDB1-215ENST00000539712 RSPH14Q9UHP6 348 aa16.55■□□□□ 0.24
DDB1-215ENST00000539712 CCDC66A2RUB6 948 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 H7C0C1 242 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 K7ENP7 123 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 HGSO14964 777 aaPredicted RBP16.54■□□□□ 0.24
DDB1-215ENST00000539712 GPR39O43194 453 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 ZW10O43264 779 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 BUD23O43709 281 aaKnown RBP16.54■□□□□ 0.24
DDB1-215ENST00000539712 SNX2O60749 519 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 HLA-DPA1P20036 260 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 ATP5OP48047 213 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 RWDD2BP57060 319 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 GPLD1P80108 840 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 HHEXQ03014 270 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 VAC14Q08AM6 782 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 SRSF6Q13247 344 aaKnown RBP16.54■□□□□ 0.24
DDB1-215ENST00000539712 NFATC2Q13469 925 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 BIRC2Q13490 618 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 OLIG2Q13516 323 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 PTPRCAPQ14761 206 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 CHRNA6Q15825 494 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 TMEM71Q6P5X7 295 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 INO80CQ6PI98 192 aaPredicted RBP16.54■□□□□ 0.24
DDB1-215ENST00000539712 CRTC3Q6UUV7 619 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 RANBP10Q6VN20 620 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 DTX1Q86Y01 620 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 PHYKPLQ8IUZ5 450 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 SLC38A3Q99624 504 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 ZNF624Q9P2J8 865 aaPredicted RBP16.54■□□□□ 0.24
DDB1-215ENST00000539712 CPNE7Q9UBL6 633 aa16.54■□□□□ 0.24
DDB1-215ENST00000539712 KIR2DS5A0A0G2JLQ3 304 aa16.53■□□□□ 0.24
DDB1-215ENST00000539712 A0A0G2JNG1 304 aa16.53■□□□□ 0.24
DDB1-215ENST00000539712 KIR2DS3K7RE56 304 aa16.53■□□□□ 0.24
DDB1-215ENST00000539712 VEGFDO43915 354 aa16.53■□□□□ 0.24
DDB1-215ENST00000539712 UGT1A9O60656 530 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms