RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 GRM2Q14416 872 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 PSAPL1Q6NUJ1 521 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 TRIM74Q86UV6 250 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 TRIM73Q86UV7 250 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 PIANPQ8IYJ0 282 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 DEFB107AQ8IZN7 70 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 TMEM151AQ8N4L1 468 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 HIPK4Q8NE63 616 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 OR2A12Q8NGT7 310 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 NXNL1Q96CM4 212 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 GPR39O43194 453 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 CLDN7O95471 211 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 POP4O95707 220 aaKnown RBP16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 UGT2B4P06133 528 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 CPA3P15088 417 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 NCF2P19878 526 aaPredicted RBP16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 OGNP20774 298 aaKnown RBP16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 ABCE1P61221 599 aaKnown RBP16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 TRIP10Q15642 601 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 TYSND1Q2T9J0 566 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 HPS6Q86YV9 775 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 TDHQ8IZJ6 230 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 FAM83CQ9BQN1 747 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 PKP3Q9Y446 797 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 C1orf232A0A0U1RR37 186 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 LOC100653049A0A140TA62 436 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 KRT34O76011 436 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 CDKN3Q16667 212 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 PTPRNQ16849 979 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 TCHHL1Q5QJ38 904 aaPredicted RBP16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 FRMD7Q6ZUT3 714 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 PHTF2Q8N3S3 785 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 FBXW8Q8N3Y1 598 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 GRIN3AQ8TCU5 1115 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 FRS2Q8WU20 508 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 GPR78Q96P69 363 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 CPEB1Q9BZB8 566 aaKnown RBP16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 ZFYVE1Q9HBF4 777 aa16.96■□□□□ 0.31
PCDHB17P-201ENST00000539533 G3V2L1 256 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 TK2O00142 265 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 SBK3P0C264 359 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 PABPC4LP0CB38 370 aaKnown RBP16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 RALBP11234 206 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 GRIA2P42262 883 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 TBL3Q12788 808 aaKnown RBP16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 GAB4Q2WGN9 574 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 MMEL1Q495T6 779 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 ZRANB3Q5FWF4 1079 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 VITQ6UXI7 678 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 TSPAN33Q86UF1 283 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 PIM3Q86V86 326 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 LCA5Q86VQ0 697 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 ETFBKMTQ8IXQ9 262 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 FSTL5Q8N475 847 aaPredicted RBP16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 EFCAB3Q8N7B9 438 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 ZNF366Q8N895 744 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 KIAA1958Q8N8K9 716 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 ECHDC3Q96DC8 303 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 CDH7Q9ULB5 785 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 UBA6A0AVT1 1052 aaPredicted RBP16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 NPIPB15A6NHN6 443 aaPredicted RBP16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 CASQ2O14958 399 aaPredicted RBP16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 NFATC1O95644 943 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 COL6A2P12110 1019 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 TIAL1Q01085 375 aaKnown RBP eCLIP16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 DLX2Q07687 328 aaPredicted RBP16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 ITGA9Q13797 1035 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 LRRC73Q5JTD7 316 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 TMEM207Q6UWW9 146 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 SCYL1Q96KG9 808 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 TSNARE1Q96NA8 513 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 TRPV4Q9HBA0 871 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 ZFP14Q9HCL3 533 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 PREBQ9HCU5 417 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 HPS4Q9NQG7 708 aa16.95■□□□□ 0.3
PCDHB17P-201ENST00000539533 CAPN8A6NHC0 703 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 PRRT4C9JH25 899 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 H3BNX3 289 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 H7C0S8 307 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 DCXO43602 365 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 RAD51Q06609 339 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 CSHL1Q14406 222 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 MYBPC3Q14896 1274 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 PDK3Q15120 406 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 KBTBD6Q86V97 674 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 HEXDCQ8WVB3 486 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 ANKRD49Q8WVL7 239 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 NXPE3Q969Y0 559 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 MYADMQ96S97 322 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 PLA2G2FQ9BZM2 168 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 CLEC1BQ9P126 229 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 TMCO1Q9UM00 188 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 A0A087X1B8 175 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 PEX1O43933 1283 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 NDUFS3O75489 264 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 CCDC166P0CW27 439 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 COX4I1P13073 169 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 PRDX6P30041 224 aa16.94■□□□□ 0.3
PCDHB17P-201ENST00000539533 FMO4P31512 558 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms