RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 GDAP1Q8TB36 358 aa15.57■□□□□ 0.08
RPAIN-206ENST00000539417 GRK7Q8WTQ7 553 aa15.57■□□□□ 0.08
RPAIN-206ENST00000539417 STYXQ8WUJ0 223 aa15.57■□□□□ 0.08
RPAIN-206ENST00000539417 PATE1Q8WXA2 126 aa15.57■□□□□ 0.08
RPAIN-206ENST00000539417 SLCO2A1Q92959 643 aa15.57■□□□□ 0.08
RPAIN-206ENST00000539417 RANBP9Q96S59 729 aa15.57■□□□□ 0.08
RPAIN-206ENST00000539417 KRT12Q99456 494 aa15.57■□□□□ 0.08
RPAIN-206ENST00000539417 TRNAU1APQ9NX07 287 aaKnown RBP15.57■□□□□ 0.08
RPAIN-206ENST00000539417 GULP1Q9UBP9 304 aa15.57■□□□□ 0.08
RPAIN-206ENST00000539417 GPR34Q9UPC5 381 aa15.57■□□□□ 0.08
RPAIN-206ENST00000539417 DOLKQ9UPQ8 538 aa15.57■□□□□ 0.08
RPAIN-206ENST00000539417 WASF3Q9UPY6 502 aa15.57■□□□□ 0.08
RPAIN-206ENST00000539417 KCNK6Q9Y257 313 aa15.57■□□□□ 0.08
RPAIN-206ENST00000539417 TCAF1Q9Y4C2 921 aa15.57■□□□□ 0.08
RPAIN-206ENST00000539417 CCDC162PA2VCL2 907 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 B4DGG1 531 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 CHUKO15111 745 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 TTI1O43156 1089 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 GRID2O43424 1007 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 NOBOXO60393 691 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 ADRB1P08588 477 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 ALPPL2P10696 532 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 CKMT1AP12532 417 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 ACP5P13686 325 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 ADRA1DP25100 572 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 PAFAH1B1P43034 410 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 FOXC1Q12948 553 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 PERM1Q5SV97 790 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 RNASEH2BQ5TBB1 312 aaKnown RBP15.56■□□□□ 0.08
RPAIN-206ENST00000539417 ZCCHC8Q6NZY4 707 aaKnown RBP15.56■□□□□ 0.08
RPAIN-206ENST00000539417 CES3Q6UWW8 571 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 CHCHD4Q8N4Q1 142 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 NAT8LQ8N9F0 302 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 DDHD1Q8NEL9 900 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 SMOXQ9NWM0 555 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 TAAR2Q9P1P5 351 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 RABGEF1Q9UJ41 708 aa15.56■□□□□ 0.08
RPAIN-206ENST00000539417 ZFC3H1O60293 1989 aaKnown RBP15.55■□□□□ 0.08
RPAIN-206ENST00000539417 ARHGEF17Q96PE2 2063 aaPredicted RBP15.55■□□□□ 0.08
RPAIN-206ENST00000539417 HEATR9A2RTY3 570 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 H7C0S8 307 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 SGTAO43765 313 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 CDK14O94921 469 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 GAS8O95995 478 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 ACP1P24666 158 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 NMBRP28336 390 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 ACTR1BP42025 376 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 ACTR1AP61163 376 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 DAB2P98082 770 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 PDE1BQ01064 536 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 ITGA9Q13797 1035 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 SMAD1Q15797 465 aaKnown RBP15.55■□□□□ 0.08
RPAIN-206ENST00000539417 HS1BP3Q53T59 392 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 OGFOD3Q6PK18 319 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 DHRS13Q6UX07 377 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 DET1Q7L5Y6 550 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 C11orf96Q7Z7L8 435 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 JAMLQ86YT9 394 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 SPATA4Q8NEY3 305 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 HDAC10Q969S8 669 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 PWWP2AQ96N64 755 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 DUSP23Q9BVJ7 150 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 DPEP2Q9H4A9 486 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 RNF14Q9UBS8 474 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 ASIC3Q9UHC3 531 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 APPL1Q9UKG1 709 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 AKAP13Q12802 2813 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 NCOR2Q9Y618 2525 aa15.55■□□□□ 0.08
RPAIN-206ENST00000539417 TRBV23OR9-2A0A075B6M9 112 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 TRBV5-4A0A0C4DH59 114 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 CPED1A4D0V7 1026 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 OR2AG2A6NM03 316 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 DNALI1O14645 258 aaPredicted RBP15.54■□□□□ 0.08
RPAIN-206ENST00000539417 HYAL3O43820 417 aaPredicted RBP15.54■□□□□ 0.08
RPAIN-206ENST00000539417 FOXN2P32314 431 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 HADHAP40939 763 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 MAZP56270 477 aaKnown RBP15.54■□□□□ 0.08
RPAIN-206ENST00000539417 CDK16Q00536 496 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 DR1Q01658 176 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 ACVR1Q04771 509 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 ILF3Q12906 894 aaKnown RBP eCLIP15.54■□□□□ 0.082e-6■■□□□ 12.4
RPAIN-206ENST00000539417 SEMA3AQ14563 771 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 ZRANB3Q5FWF4 1079 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 LVRNQ6Q4G3 990 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 XKR5Q6UX68 686 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 ERMP1Q7Z2K6 904 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 SNX20Q7Z614 316 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 NXPE1Q8N323 547 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 BEND7Q8N7W2 519 aaPredicted RBP15.54■□□□□ 0.08
RPAIN-206ENST00000539417 GPR156Q8NFN8 814 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 SGF29Q96ES7 293 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 SERPINB12Q96P63 405 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 GSDMCQ9BYG8 508 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 RMI1Q9H9A7 625 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 TBC1D29Q9UFV1 150 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 WDFY3Q8IZQ1 3526 aa15.54■□□□□ 0.08
RPAIN-206ENST00000539417 GOLGA4Q13439 2230 aaKnown RBP15.53■□□□□ 0.08
RPAIN-206ENST00000539417 CCDC188H7C350 402 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 TP73O15350 636 aa15.53■□□□□ 0.08
RPAIN-206ENST00000539417 VEGFDO43915 354 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms