RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 RSPH14Q9UHP6 348 aa14.8□□□□□ -0.04
RAB40B-202ENST00000538809 IGHV5-10-1A0A0J9YXX1 117 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 EIF4E1BA6NMX2 242 aaKnown RBP14.79□□□□□ -0.04
RAB40B-202ENST00000538809 H7C0C1 242 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 PRB1P04280 392 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 PYGMP11217 842 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 MPSTP25325 297 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 RBL1P28749 1068 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 GPR3P46089 330 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 FASLGP48023 281 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 ATP5OP48047 213 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 UCNP55089 124 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 OTUD4Q01804 1114 aaKnown RBP14.79□□□□□ -0.04
RAB40B-202ENST00000538809 CFHR1Q03591 330 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 NFATC2Q13469 925 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 KHDC1Q4VXA5 237 aaKnown RBP14.79□□□□□ -0.04
RAB40B-202ENST00000538809 ADGRG6Q86SQ4 1221 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 KIAA1328Q86T90 577 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 PHYKPLQ8IUZ5 450 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 SLC38A3Q99624 504 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 CMKLR1Q99788 373 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 RAD18Q9NS91 495 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 FOXJ2Q9P0K8 574 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 BAHCC1Q9P281 2608 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 PCDHGA7Q9Y5G6 932 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 ADGRG1Q9Y653 693 aa14.79□□□□□ -0.04
RAB40B-202ENST00000538809 FASNP49327 2511 aaKnown RBP14.79□□□□□ -0.04
RAB40B-202ENST00000538809 TEX51A0A1B0GUA7 166 aa14.78□□□□□ -0.04
RAB40B-202ENST00000538809 A6NCN8 305 aa14.78□□□□□ -0.04
RAB40B-202ENST00000538809 DDX3YO15523 660 aaKnown RBP14.78□□□□□ -0.04
RAB40B-202ENST00000538809 ZW10O43264 779 aa14.78□□□□□ -0.04
RAB40B-202ENST00000538809 BUD23O43709 281 aaKnown RBP14.78□□□□□ -0.04
RAB40B-202ENST00000538809 EPOP01588 193 aa14.78□□□□□ -0.04
RAB40B-202ENST00000538809 CCL4P13236 92 aa14.78□□□□□ -0.04
RAB40B-202ENST00000538809 TNNT3P45378 269 aaPredicted RBP14.78□□□□□ -0.04
RAB40B-202ENST00000538809 MAPK9P45984 424 aa14.78□□□□□ -0.04
RAB40B-202ENST00000538809 HHEXQ03014 270 aa14.78□□□□□ -0.04
RAB40B-202ENST00000538809 SRSF6Q13247 344 aaKnown RBP14.78□□□□□ -0.04
RAB40B-202ENST00000538809 TGIF1Q15583 401 aa14.78□□□□□ -0.04
RAB40B-202ENST00000538809 INSCQ1MX18 579 aa14.78□□□□□ -0.04
RAB40B-202ENST00000538809 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.78□□□□□ -0.04
RAB40B-202ENST00000538809 TTC30BQ8N4P2 665 aa14.78□□□□□ -0.04
RAB40B-202ENST00000538809 BLOC1S5Q8TDH9 187 aa14.78□□□□□ -0.04
RAB40B-202ENST00000538809 USP7Q93009 1102 aa14.78□□□□□ -0.04
RAB40B-202ENST00000538809 TMEM159Q96B96 161 aa14.78□□□□□ -0.04
RAB40B-202ENST00000538809 TRIM39Q9HCM9 518 aa14.78□□□□□ -0.04
RAB40B-202ENST00000538809 PRDM8Q9NQV8 689 aa14.78□□□□□ -0.04
RAB40B-202ENST00000538809 KLC4Q9NSK0 619 aa14.78□□□□□ -0.04
RAB40B-202ENST00000538809 TRHDEQ9UKU6 1024 aa14.78□□□□□ -0.04
RAB40B-202ENST00000538809 TMPRSS11EQ9UL52 423 aa14.78□□□□□ -0.04
RAB40B-202ENST00000538809 DNAJC16Q9Y2G8 782 aa14.78□□□□□ -0.04
RAB40B-202ENST00000538809 CAPN6Q9Y6Q1 641 aa14.78□□□□□ -0.04
RAB40B-202ENST00000538809 C9orf172C9J069 976 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 ATXN7O15265 892 aaPredicted RBP14.77□□□□□ -0.05
RAB40B-202ENST00000538809 GPR39O43194 453 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 THRAP10827 490 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 F3P13726 295 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 LIMK2P53671 638 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 VAC14Q08AM6 782 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 KIF5AQ12840 1032 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 MPP3Q13368 585 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 SLC1A5Q15758 541 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 SEPT7Q16181 437 aaKnown RBP14.77□□□□□ -0.05
RAB40B-202ENST00000538809 ATP13A5Q4VNC0 1218 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 PDPK2PQ6A1A2 396 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 IYDQ6PHW0 289 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 GLT6D1Q7Z4J2 308 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 LRRTM4Q86VH4 590 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 ZFAND4Q86XD8 727 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 OR4D9Q8NGE8 314 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 SLC39A7Q92504 469 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 PMEPA1Q969W9 287 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 AHCYL2Q96HN2 611 aaKnown RBP14.77□□□□□ -0.05
RAB40B-202ENST00000538809 PLEKHG4BQ96PX9 1271 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 SRPK1Q96SB4 655 aaKnown RBP14.77□□□□□ -0.05
RAB40B-202ENST00000538809 FICDQ9BVA6 458 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 FSD1LQ9BXM9 530 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 GBA3Q9H227 469 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 STN1Q9H668 368 aaKnown RBP14.77□□□□□ -0.05
RAB40B-202ENST00000538809 AKAP7Q9P0M2 348 aaPredicted RBP14.77□□□□□ -0.05
RAB40B-202ENST00000538809 SLC23A2Q9UGH3 650 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 AMFRQ9UKV5 643 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 PACSIN2Q9UNF0 486 aaPredicted RBP14.77□□□□□ -0.05
RAB40B-202ENST00000538809 SSUH2Q9Y2M2 353 aa14.77□□□□□ -0.05
RAB40B-202ENST00000538809 MIF4GDA9UHW6 222 aaKnown RBP14.76□□□□□ -0.05
RAB40B-202ENST00000538809 HGSO14964 777 aaPredicted RBP14.76□□□□□ -0.05
RAB40B-202ENST00000538809 CHUKO15111 745 aa14.76□□□□□ -0.05
RAB40B-202ENST00000538809 NVLO15381 856 aaKnown RBP14.76□□□□□ -0.05
RAB40B-202ENST00000538809 DUX1O43812 170 aa14.76□□□□□ -0.05
RAB40B-202ENST00000538809 FTCDO95954 541 aa14.76□□□□□ -0.05
RAB40B-202ENST00000538809 RBP3P10745 1247 aa14.76□□□□□ -0.05
RAB40B-202ENST00000538809 HLA-DPA1P20036 260 aa14.76□□□□□ -0.05
RAB40B-202ENST00000538809 HMGCLP35914 325 aa14.76□□□□□ -0.05
RAB40B-202ENST00000538809 EIF3EP60228 445 aaKnown RBP14.76□□□□□ -0.05
RAB40B-202ENST00000538809 GPLD1P80108 840 aa14.76□□□□□ -0.05
RAB40B-202ENST00000538809 KLF1Q13351 362 aaPredicted RBP14.76□□□□□ -0.05
RAB40B-202ENST00000538809 OLIG2Q13516 323 aa14.76□□□□□ -0.05
RAB40B-202ENST00000538809 CLPPQ16740 277 aaPredicted RBP14.76□□□□□ -0.05
RAB40B-202ENST00000538809 SNAP47Q5SQN1 464 aa14.76□□□□□ -0.05
RAB40B-202ENST00000538809 KIAA1614Q5VZ46 1190 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms