RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 HK2P52789 917 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 ILF2Q12905 390 aaKnown RBP10.67□□□□□ -0.7
CLIP1-210ENST00000538120 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.67□□□□□ -0.7
CLIP1-210ENST00000538120 MPPE1Q53F39 396 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 TMEM240Q5SV17 173 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 MPP7Q5T2T1 576 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 PSAPL1Q6NUJ1 521 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 RPS27LQ71UM5 84 aaKnown RBP10.67□□□□□ -0.7
CLIP1-210ENST00000538120 PIWIL4Q7Z3Z4 852 aaKnown RBP10.67□□□□□ -0.7
CLIP1-210ENST00000538120 METTL25Q8N6Q8 603 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 MRPL43Q8N983 215 aaKnown RBP10.67□□□□□ -0.7
CLIP1-210ENST00000538120 ICA1LQ8NDH6 482 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 FIBINQ8TAL6 211 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 PIH1D2Q8WWB5 315 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 JADE3Q92613 823 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 TCEAL4Q96EI5 215 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 MPP4Q96JB8 637 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 LENG8Q96PV6 779 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-210ENST00000538120 SLX1AQ9BQ83 275 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 TM6SF2Q9BZW4 377 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 BPIFA1Q9NP55 256 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 TNFRSF12AQ9NP84 129 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 CCL26Q9Y258 94 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 PCDHB9Q9Y5E1 797 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 TMEM233B4DJY2 109 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 H3BMM5 538 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 AIM2O14862 343 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 TFAP2AP05549 437 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 HNRNPLP14866 589 aaKnown RBP eCLIP10.66□□□□□ -0.7
CLIP1-210ENST00000538120 ZNF37AP17032 561 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-210ENST00000538120 HOXB8P17481 243 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-210ENST00000538120 FMO4P31512 558 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 MC4RP32245 332 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 PLK1P53350 603 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 XIAPP98170 497 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 KLF10Q13118 480 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 PLPP4Q5VZY2 271 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 SEL1L3Q68CR1 1132 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 KLC3Q6P597 504 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 CAMK1DQ8IU85 385 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 RNF148Q8N7C7 305 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 OR6K2Q8NGY2 324 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 STON2Q8WXE9 905 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 DCUN1D1Q96GG9 259 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 CNDP1Q96KN2 507 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 BIRC8Q96P09 236 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 TCF12Q99081 682 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 C2orf49Q9BVC5 232 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-210ENST00000538120 NUF2Q9BZD4 464 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 ASAH2Q9NR71 780 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 GALPQ9UBC7 116 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 EVLQ9UI08 416 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-210ENST00000538120 IKZF3Q9UKT9 509 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 ARHGAP26Q9UNA1 814 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 DTNAQ9Y4J8 743 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 LAMA2P24043 3122 aaKnown RBP10.66□□□□□ -0.7
CLIP1-210ENST00000538120 H7C0S8 307 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 CASQ2O14958 399 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-210ENST00000538120 VILLO15195 856 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 DNAJA2O60884 412 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 PGLSO95336 258 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 GLUD1P00367 558 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 CTPS1P17812 591 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 EPHA3P29320 983 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 GKP32189 559 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 BMPR1AP36894 532 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 CLCN4P51793 760 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 AP1S1P61966 158 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 MRPS22P82650 360 aaKnown RBP10.66□□□□□ -0.7
CLIP1-210ENST00000538120 PPIGQ13427 754 aaKnown RBP eCLIP10.66□□□□□ -0.7
CLIP1-210ENST00000538120 OR4D1Q15615 310 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 LSM12Q3MHD2 195 aaKnown RBP10.66□□□□□ -0.7
CLIP1-210ENST00000538120 LRRC23Q53EV4 343 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-210ENST00000538120 OGFRL1Q5TC84 451 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-210ENST00000538120 METTL21CQ5VZV1 264 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 C16orf87Q6PH81 154 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 RBM44Q6ZP01 1051 aaKnown RBP10.66□□□□□ -0.7
CLIP1-210ENST00000538120 SPRED2Q7Z698 418 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 UBE2Q1Q7Z7E8 422 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 PHF21BQ96EK2 531 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 EMILIN2Q9BXX0 1053 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 GSTO2Q9H4Y5 243 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 TCF7L2Q9NQB0 619 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 UTP6Q9NYH9 597 aaKnown RBP10.66□□□□□ -0.7
CLIP1-210ENST00000538120 NCKIPSDQ9NZQ3 722 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 IL17CQ9P0M4 197 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 VTI1BQ9UEU0 232 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 APPL1Q9UKG1 709 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 ZNF711Q9Y462 761 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 AK5Q9Y6K8 562 aa10.66□□□□□ -0.7
CLIP1-210ENST00000538120 UBA6A0AVT1 1052 aaPredicted RBP10.65□□□□□ -0.7
CLIP1-210ENST00000538120 NEMP1O14524 444 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 STX7O15400 261 aaKnown RBP10.65□□□□□ -0.7
CLIP1-210ENST00000538120 OR1I1O60431 355 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 RFPL2O75678 378 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 ALPIP09923 528 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 ATP6V1B1P15313 513 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 PFKLP17858 780 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 IMPDH1P20839 514 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 CTSOP43234 321 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms