RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 NLRC5Q86WI3 1866 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 ZC3H7AQ8IWR0 971 aaKnown RBP12.06□□□□□ -0.48
CPSF7-218ENST00000537641 UMODL1-AS1Q8N2C9 162 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 FBXO39Q8N4B4 442 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 DPP10Q8N608 796 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 OR52K2Q8NGK3 314 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 DNAJB14Q8TBM8 379 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 KIAA1191Q96A73 305 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 GLT1D1Q96MS3 346 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 TMEM209Q96SK2 561 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 AARSD1Q9BTE6 412 aaKnown RBP12.06□□□□□ -0.48
CPSF7-218ENST00000537641 CHID1Q9BWS9 393 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 LRRC3Q9BY71 257 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 ING2Q9H160 280 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 NT5MQ9NPB1 228 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 HPS4Q9NQG7 708 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 SUN2Q9UH99 717 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 BTRCQ9Y297 605 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 PCDHGA11Q9Y5H2 935 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 TTC36A6NLP5 189 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 H0Y858 1186 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 GPR182O15218 404 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 LDB2O43679 373 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 SLC22A3O75751 556 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 GLP2RO95838 553 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 C1RP00736 705 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 CHRNA1P02708 482 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 MMP2P08253 660 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 LINC00032P0C843 101 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 UROSP10746 265 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 CYBAP13498 195 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 EEF1DP29692 281 aaKnown RBP12.06□□□□□ -0.48
CPSF7-218ENST00000537641 SHMT2P34897 504 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 POLR2IP36954 125 aaKnown RBP12.06□□□□□ -0.48
CPSF7-218ENST00000537641 PSMD7P51665 324 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 POLR2JP52435 117 aaKnown RBP12.06□□□□□ -0.48
CPSF7-218ENST00000537641 ERVK-8P63133 956 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 TIAL1Q01085 375 aaKnown RBP eCLIP12.06□□□□□ -0.485e-6■■■■□ 21
CPSF7-218ENST00000537641 MGAT3Q09327 533 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 ZNF846Q147U1 533 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 PAGE3Q5JUK9 113 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 SIRPB2Q5JXA9 342 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 MARC1Q5VT66 337 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 XAF1Q6GPH4 301 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 ZNF549Q6P9A3 640 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 TXNDC11Q6PKC3 985 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 CXCL17Q6UXB2 119 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 THAP5Q7Z6K1 395 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 IFNEQ86WN2 208 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 SPNS2Q8IVW8 549 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 AADATQ8N5Z0 425 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 SLC15A4Q8N697 577 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 TEX26Q8N6G2 289 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 MINDY2Q8NBR6 621 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 STAG3L4Q8TBR4 150 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 ISG20Q96AZ6 181 aaKnown RBP12.06□□□□□ -0.48
CPSF7-218ENST00000537641 AURKBQ96GD4 344 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-218ENST00000537641 ZNF599Q96NL3 588 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 KCNA7Q96RP8 456 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 BCL7BQ9BQE9 202 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 ACBD6Q9BR61 282 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 BEGAINQ9BUH8 593 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 DERL2Q9GZP9 239 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 RAD21L1Q9H4I0 556 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 NANOGQ9H9S0 305 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 TLR9Q9NR96 1032 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 GIN1Q9NXP7 522 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 SELENONQ9NZV5 590 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 CACNG4Q9UBN1 327 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 LOC285095A0A1B0GVY8 99 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 LRRC14BA6NHZ5 514 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 SYCE1LA8MT33 242 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 SUPT3HB4E1H0 165 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 C9JVG2 144 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 UPK1AO00322 258 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 IFRD1O00458 451 aaPredicted RBP12.05□□□□□ -0.48
CPSF7-218ENST00000537641 PPP6CO00743 305 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 CD3EAPO15446 510 aaKnown RBP12.05□□□□□ -0.48
CPSF7-218ENST00000537641 SNX2O60749 519 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 RPP40O75818 363 aaKnown RBP12.05□□□□□ -0.48
CPSF7-218ENST00000537641 ANXA6P08133 673 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 CTSHP09668 335 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 ATXN1LP0C7T5 689 aaKnown RBP12.05□□□□□ -0.48
CPSF7-218ENST00000537641 RAP2AP10114 183 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 ODC1P11926 461 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 BDNFP23560 247 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 EEF1B2P24534 225 aaKnown RBP12.05□□□□□ -0.48
CPSF7-218ENST00000537641 YAP1P46937 504 aaKnown RBP12.05□□□□□ -0.48
CPSF7-218ENST00000537641 SCNN1GP51170 649 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 APLP1P51693 650 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 DIO3P55073 304 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 YBX1P67809 324 aaKnown RBP12.05□□□□□ -0.48
CPSF7-218ENST00000537641 ATP1A4Q13733 1029 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 PLCL1Q15111 1095 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 UPP1Q16831 310 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 GTF2IRD2BQ6EKJ0 949 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 GLYATQ6IB77 296 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 RGMBQ6NW40 437 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 GALNT18Q6P9A2 607 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 TBPL2Q6SJ96 375 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms