RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 IRF2BP1Q8IU81 584 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 GPR65Q8IYL9 337 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 SNX33Q8WV41 574 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 TSEN15Q8WW01 171 aaKnown RBP10.58□□□□□ -0.72
CLIP1-209ENST00000537178 ABCG8Q9H221 673 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 SGK2Q9HBY8 427 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 TIMMDC1Q9NPL8 285 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 PRR5-ARHGAP8B1AHC4 643 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 MPZL2O60487 215 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 TLR5O60602 858 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 TIPRLO75663 272 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 AP2A2O94973 939 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 SNX4O95219 450 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 IFNW1P05000 195 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 PKMP14618 531 aaKnown RBP10.58□□□□□ -0.72
CLIP1-209ENST00000537178 IGFBP4P22692 258 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 MRPS5P82675 430 aaKnown RBP10.58□□□□□ -0.72
CLIP1-209ENST00000537178 ARHGAP8P85298 464 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 KLF10Q13118 480 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 RUNDC3AQ59EK9 446 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 PYHIN1Q6K0P9 492 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 ALKBH2Q6NS38 261 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 FAM151BQ6UXP7 276 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 MON1AQ86VX9 555 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 LRRC52Q8N7C0 313 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 CHST4Q8NCG5 386 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 GSTCDQ8NEC7 633 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 EXOC2Q96KP1 924 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 CDT1Q9H211 546 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 ABCB9Q9NP78 766 aa10.58□□□□□ -0.72
CLIP1-209ENST00000537178 CCDC177Q9NQR7 707 aaPredicted RBP10.58□□□□□ -0.72
CLIP1-209ENST00000537178 IMP3Q9NV31 184 aaKnown RBP10.58□□□□□ -0.72
CLIP1-209ENST00000537178 PDP1Q9P0J1 537 aaPredicted RBP10.58□□□□□ -0.72
CLIP1-209ENST00000537178 C5orf60A6NFR6 353 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 AGRPO00253 132 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 BCKDKO14874 412 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 DCLK1O15075 740 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 SIN3BO75182 1162 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 C2P06681 752 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 PTPRAP18433 802 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 USP4Q13107 963 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 DLG2Q15700 870 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 NDUFA9Q16795 377 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 METTL21CQ5VZV1 264 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 RNF19BQ6ZMZ0 732 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 UTS2BQ765I0 119 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 ALYREFQ86V81 257 aaKnown RBP10.57□□□□□ -0.72
CLIP1-209ENST00000537178 VSIG10LQ86VR7 867 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 VANGL1Q8TAA9 524 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-209ENST00000537178 TSPAN18Q96SJ8 248 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 NOL11Q9H8H0 719 aaKnown RBP10.57□□□□□ -0.72
CLIP1-209ENST00000537178 IL17RBQ9NRM6 502 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 PNPOQ9NVS9 261 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 UPB1Q9UBR1 384 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 MSRAQ9UJ68 235 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 DNAJA2O60884 412 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 LYPLA1O75608 230 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-209ENST00000537178 DNTTP04053 509 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 KCNA5P22460 613 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 EIF2S3P41091 472 aaKnown RBP10.57□□□□□ -0.72
CLIP1-209ENST00000537178 SIM2Q14190 667 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-209ENST00000537178 CCNYL2Q5T2Q4 361 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 ARL10Q8N8L6 244 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 OR2T34Q8NGX1 318 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 OR2T3Q8NH03 318 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 HTRA1Q92743 480 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 GORASP1Q9BQQ3 440 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 GLOD4Q9HC38 313 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 PHF24Q9UPV7 400 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 R3HDM2Q9Y2K5 976 aaKnown RBP10.57□□□□□ -0.72
CLIP1-209ENST00000537178 A0A1W2PQ67 120 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 OR6C75A6NL08 312 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 DNASE1L1P49184 302 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 MRPS6P82932 125 aaKnown RBP10.57□□□□□ -0.72
CLIP1-209ENST00000537178 FMO1Q01740 532 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 SEMA5AQ13591 1074 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 EARS2Q5JPH6 523 aaKnown RBP10.57□□□□□ -0.72
CLIP1-209ENST00000537178 CELF3Q5SZQ8 465 aaKnown RBP10.57□□□□□ -0.72
CLIP1-209ENST00000537178 FKBP1CQ5VVH2 108 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 CERS6Q6ZMG9 384 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 KCNK18Q7Z418 384 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 PHYKPLQ8IUZ5 450 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 RAVER1Q8IY67 606 aaKnown RBP10.57□□□□□ -0.72
CLIP1-209ENST00000537178 ZNF567Q8N184 647 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 RASSF5Q8WWW0 418 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 PIGKQ92643 395 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 RFKQ969G6 155 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 ERLEC1Q96DZ1 483 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 MTMR9Q96QG7 549 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 CITED4Q96RK1 184 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 NPAS2Q99743 824 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 IDI2Q9BXS1 227 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 ABCG4Q9H172 646 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 IL1RAPQ9NPH3 570 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 KIAA1522Q9P206 1035 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-209ENST00000537178 MAN2B2Q9Y2E5 1009 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 METTL21EPA6NDL7 271 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 TISP43B9A030 160 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 STK16O75716 305 aa10.57□□□□□ -0.72
CLIP1-209ENST00000537178 ADRB2P07550 413 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms