RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 DTX3LQ8TDB6 740 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 TWIST2Q8WVJ9 160 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 EXT2Q93063 718 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 ULK4Q96C45 1275 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 HTATIP2Q9BUP3 242 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 TM6SF2Q9BZW4 377 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 ACSS2Q9NR19 701 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 WBP1LQ9NX94 342 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 EVLQ9UI08 416 aaPredicted RBP13.46□□□□□ -0.26
SMG6-203ENST00000536871 FIS1Q9Y3D6 152 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 DNAJC15Q9Y5T4 150 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 ZBBXA8MT70 800 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 NIPSNAP2O75323 286 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 MATN4O95460 622 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 POP4O95707 220 aaKnown RBP13.45□□□□□ -0.26
SMG6-203ENST00000536871 TSPAN12O95859 305 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 MT-CO1P00395 513 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 RPSAP08865 295 aaKnown RBP13.45□□□□□ -0.26
SMG6-203ENST00000536871 HNRNPA1P09651 372 aaKnown RBP eCLIP13.45□□□□□ -0.26
SMG6-203ENST00000536871 CBSLP0DN79 551 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 IDO1P14902 403 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 LBPP18428 481 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 ITGB8P26012 769 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 CBSP35520 551 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 CLCN7P51798 805 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 SESN3P58005 492 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 NFATC2Q13469 925 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 PCBP2Q15366 365 aaKnown RBP eCLIP13.45□□□□□ -0.263e-8■■□□□ 12.7
SMG6-203ENST00000536871 PRMT9Q6P2P2 845 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 TPRG1Q6ZUI0 275 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 TMCO2Q7Z6W1 182 aaPredicted RBP13.45□□□□□ -0.26
SMG6-203ENST00000536871 DHDDSQ86SQ9 333 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 HS6ST3Q8IZP7 471 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 CMTM8Q8IZV2 173 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 MRPL43Q8N983 215 aaKnown RBP13.45□□□□□ -0.26
SMG6-203ENST00000536871 PHOSPHO2Q8TCD6 241 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 SP7Q8TDD2 431 aaPredicted RBP13.45□□□□□ -0.26
SMG6-203ENST00000536871 SLC26A7Q8TE54 656 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 LMLNQ96KR4 655 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 ZNF570Q96NI8 536 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 ZNF382Q96SR6 550 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 RAD9AQ99638 391 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 ZNF184Q99676 751 aaPredicted RBP13.45□□□□□ -0.26
SMG6-203ENST00000536871 TCF25Q9BQ70 676 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 CORO1BQ9BR76 489 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 SLC46A2Q9BY10 475 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 SLC2A11Q9BYW1 496 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 ASB8Q9H765 288 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 BPIFA1Q9NP55 256 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 LATS2Q9NRM7 1088 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 RIC8BQ9NVN3 520 aa13.45□□□□□ -0.26
SMG6-203ENST00000536871 C6orf203Q9P0P8 240 aaPredicted RBP13.45□□□□□ -0.26
SMG6-203ENST00000536871 GLYATL1P3A0A0U1RQE8 302 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 TRIM38O00635 465 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 SLC9A3R1O14745 358 aaPredicted RBP13.44□□□□□ -0.26
SMG6-203ENST00000536871 RAD51BO15315 384 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 POU2F2P09086 479 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 LINC00271P0C7V0 271 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 SPATA31D3P0C874 917 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 ACRP10323 421 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 ACRV1P26436 265 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 HTRA3P83110 453 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 MYLK3Q32MK0 819 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 CDKL4Q5MAI5 379 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 PSRC1Q6PGN9 363 aaPredicted RBP13.44□□□□□ -0.26
SMG6-203ENST00000536871 MACC1Q6ZN28 852 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 SPATA31D4Q6ZUB0 917 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 FRA10AC1Q70Z53 315 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 OTOP2Q7RTS6 562 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 KBTBD6Q86V97 674 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 SERPINA9Q86WD7 417 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 HPS6Q86YV9 775 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 MYO1HQ8N1T3 1032 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 DRAXINQ8NBI3 349 aaPredicted RBP13.44□□□□□ -0.26
SMG6-203ENST00000536871 SIDT2Q8NBJ9 832 aaKnown RBP13.44□□□□□ -0.26
SMG6-203ENST00000536871 CATSPER1Q8NEC5 780 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 SH3RF2Q8TEC5 729 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 TRPC4APQ8TEL6 797 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 ECHDC3Q96DC8 303 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 SCRN2Q96FV2 425 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 CDRT15Q96T59 188 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 RAD18Q9NS91 495 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 CD274Q9NZQ7 290 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 PRKAG2Q9UGJ0 569 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 CRLS1Q9UJA2 301 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 G3BP2Q9UN86 482 aaKnown RBP13.44□□□□□ -0.26
SMG6-203ENST00000536871 NDUFAF1Q9Y375 327 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 DNAH12Q6ZR08 3092 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 DYTNA2CJ06 578 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 NPEPPSL1A6NEC2 478 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 A6NHS1 94 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 AGAP14A8MT82 685 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 CDC7O00311 574 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 SMAD6O43541 496 aaKnown RBP13.44□□□□□ -0.26
SMG6-203ENST00000536871 PEX1O43933 1283 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 XYLBO75191 536 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 PDE5AO76074 875 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 STAMBPO95630 424 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 PRSS56P0CW18 603 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 SRCP12931 536 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms