RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 LPOP22079 712 aaPredicted RBP13□□□□□ -0.33
PRKDC-206ENST00000536429 ZNF140P52738 457 aaPredicted RBP13□□□□□ -0.33
PRKDC-206ENST00000536429 OR1D5P58170 312 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 XIAPP98170 497 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 B4GALNT1Q00973 533 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 LRP8Q14114 963 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 RTP5Q14D33 572 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 TAF1AQ15573 450 aaPredicted RBP13□□□□□ -0.33
PRKDC-206ENST00000536429 P3H1Q32P28 736 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 RBM44Q6ZP01 1051 aaKnown RBP13□□□□□ -0.33
PRKDC-206ENST00000536429 SPRED1Q7Z699 444 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 ZNF761Q86XN6 746 aaPredicted RBP13□□□□□ -0.33
PRKDC-206ENST00000536429 CCNJLQ8IV13 435 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 BRSK1Q8TDC3 778 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 SLC37A2Q8TED4 501 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 UBE2Q2Q8WVN8 375 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 FRMD8P1Q9BZ68 369 aaPredicted RBP13□□□□□ -0.33
PRKDC-206ENST00000536429 LRRN3Q9H3W5 708 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 RMI1Q9H9A7 625 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 ETNK1Q9HBU6 452 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 ARNT2Q9HBZ2 717 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 TRMT1Q9NXH9 659 aaKnown RBP13□□□□□ -0.33
PRKDC-206ENST00000536429 ZNF148Q9UQR1 794 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 PKP3Q9Y446 797 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 ENTPD2Q9Y5L3 495 aa13□□□□□ -0.33
PRKDC-206ENST00000536429 C2orf81A6NN90 581 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 D6RAR5 112 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 LDB2O43679 373 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 BRINP1O60477 761 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 SNX2O60749 519 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 TCEA3O75764 348 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 KRT37O76014 449 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 CDK14O94921 469 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 PRAMEF1O95521 474 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 STIP1P31948 543 aaKnown RBP12.99□□□□□ -0.33
PRKDC-206ENST00000536429 GRIA1P42261 906 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 KCNJ1P48048 391 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 CTSCP53634 463 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 TMEM115Q12893 351 aaPredicted RBP12.99□□□□□ -0.33
PRKDC-206ENST00000536429 PEX6Q13608 980 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 SPIDRQ14159 915 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 GPRC6AQ5T6X5 926 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 ZNF438Q7Z4V0 828 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 C11orf96Q7Z7L8 435 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 SLC35F6Q8N357 371 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 RASGEF1AQ8N9B8 481 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 OR6C4Q8NGE1 309 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 GDAP1Q8TB36 358 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 DTX3LQ8TDB6 740 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 NXPE2Q96DL1 559 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 MS4A14Q96JA4 679 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 PDLIM2Q96JY6 352 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 DNAJC1Q96KC8 554 aaKnown RBP12.99□□□□□ -0.33
PRKDC-206ENST00000536429 PPP1R2P1Q96PQ5 205 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 FOXP3Q9BZS1 431 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 NRSN2Q9GZP1 204 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 FAM96AQ9H5X1 160 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 LRRC40Q9H9A6 602 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 PRDM8Q9NQV8 689 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 KLC4Q9NSK0 619 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 SMARCAL1Q9NZC9 954 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 SCHIP1Q9P0W5 487 aaPredicted RBP12.99□□□□□ -0.33
PRKDC-206ENST00000536429 DKK4Q9UBT3 224 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 DNAJC16Q9Y2G8 782 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 AK5Q9Y6K8 562 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 SCN8AQ9UQD0 1980 aa12.99□□□□□ -0.33
PRKDC-206ENST00000536429 CCDC78A2IDD5 438 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 PRR19A6NJB7 356 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 USP27XA6NNY8 438 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 RHPN2P1A8MT19 583 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 AGRPO00253 132 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 TLX3O43711 291 aaPredicted RBP12.98□□□□□ -0.33
PRKDC-206ENST00000536429 VEGFDO43915 354 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 PPFIA2O75334 1257 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 PRSS56P0CW18 603 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 PNLIPP16233 465 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 ALDH4A1P30038 563 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 RPL22P35268 128 aaKnown RBP12.98□□□□□ -0.33
PRKDC-206ENST00000536429 GABREP78334 506 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 POU6F1Q14863 301 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 NR1D2Q14995 579 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 CCNG2Q16589 344 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 LONRF2Q1L5Z9 754 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 AMZ1Q400G9 498 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 NKAIN2Q5VXU1 208 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 ZDHHC20Q5W0Z9 365 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 LRRTM4Q86VH4 590 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 SFRP1Q8N474 314 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 PRELID2Q8N945 189 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 DDHD1Q8NEL9 900 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 OR52K1Q8NGK4 314 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 ZNF398Q8TD17 642 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 GFM1Q96RP9 751 aaKnown RBP12.98□□□□□ -0.33
PRKDC-206ENST00000536429 NUDT22Q9BRQ3 303 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 OSGEPL1Q9H4B0 414 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 RDH14Q9HBH5 336 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 RAB6BQ9NRW1 208 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 SMOXQ9NWM0 555 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 SATB2Q9UPW6 733 aa12.98□□□□□ -0.33
PRKDC-206ENST00000536429 GPR89AB7ZAQ6 455 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms