RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 LRP8Q14114 963 aa14.09□□□□□ -0.15
UBE3B-206ENST00000536398 RPS6KA1Q15418 735 aa14.09□□□□□ -0.15
UBE3B-206ENST00000536398 COL28A1Q2UY09 1125 aa14.09□□□□□ -0.15
UBE3B-206ENST00000536398 TBC1D25Q3MII6 688 aa14.09□□□□□ -0.15
UBE3B-206ENST00000536398 PDPK2PQ6A1A2 396 aa14.09□□□□□ -0.15
UBE3B-206ENST00000536398 ZNF574Q6ZN55 896 aaPredicted RBP14.09□□□□□ -0.15
UBE3B-206ENST00000536398 ARHGEF18Q6ZSZ5 1173 aa14.09□□□□□ -0.15
UBE3B-206ENST00000536398 SLC13A5Q86YT5 568 aaPredicted RBP14.09□□□□□ -0.15
UBE3B-206ENST00000536398 PHYKPLQ8IUZ5 450 aa14.09□□□□□ -0.15
UBE3B-206ENST00000536398 NAT14Q8WUY8 206 aa14.09□□□□□ -0.15
UBE3B-206ENST00000536398 C1orf54Q8WWF1 131 aa14.09□□□□□ -0.15
UBE3B-206ENST00000536398 FGF11Q92914 225 aa14.09□□□□□ -0.15
UBE3B-206ENST00000536398 CRELD1Q96HD1 420 aa14.09□□□□□ -0.15
UBE3B-206ENST00000536398 VPS35Q96QK1 796 aa14.09□□□□□ -0.15
UBE3B-206ENST00000536398 TBL1YQ9BQ87 522 aa14.09□□□□□ -0.15
UBE3B-206ENST00000536398 SEMA6CQ9H3T2 930 aa14.09□□□□□ -0.15
UBE3B-206ENST00000536398 EPB41L5Q9HCM4 733 aa14.09□□□□□ -0.15
UBE3B-206ENST00000536398 ASCL3Q9NQ33 180 aa14.09□□□□□ -0.15
UBE3B-206ENST00000536398 KLC4Q9NSK0 619 aa14.09□□□□□ -0.15
UBE3B-206ENST00000536398 PIH1D1Q9NWS0 290 aaKnown RBP14.09□□□□□ -0.15
UBE3B-206ENST00000536398 HACD3Q9P035 362 aa14.09□□□□□ -0.15
UBE3B-206ENST00000536398 SCHIP1Q9P0W5 487 aaPredicted RBP14.09□□□□□ -0.15
UBE3B-206ENST00000536398 PKD1L2Q7Z442 2459 aa14.09□□□□□ -0.15
UBE3B-206ENST00000536398 DSPP15924 2871 aaKnown RBP14.09□□□□□ -0.15
UBE3B-206ENST00000536398 KIF26BQ2KJY2 2108 aa14.09□□□□□ -0.15
UBE3B-206ENST00000536398 BPTFQ12830 3046 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 GLYATL1P3A0A0U1RQE8 302 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 CCL22O00626 93 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 STX7O15400 261 aaKnown RBP14.08□□□□□ -0.16
UBE3B-206ENST00000536398 LIASO43766 372 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 CDK14O94921 469 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 HOXB3P14651 431 aaPredicted RBP14.08□□□□□ -0.16
UBE3B-206ENST00000536398 ETS1P14921 441 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 ACTN2P35609 894 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 INHBCP55103 352 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 CFHR1Q03591 330 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 ZFP36L1Q07352 338 aaKnown RBP14.08□□□□□ -0.16
UBE3B-206ENST00000536398 TMEM115Q12893 351 aaPredicted RBP14.08□□□□□ -0.16
UBE3B-206ENST00000536398 BIRC2Q13490 618 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 SNX1Q13596 522 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 NR1D2Q14995 579 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 TAF1AQ15573 450 aaPredicted RBP14.08□□□□□ -0.16
UBE3B-206ENST00000536398 KCTD19Q17RG1 926 aaPredicted RBP14.08□□□□□ -0.16
UBE3B-206ENST00000536398 PARP6Q2NL67 630 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 SEL1L2Q5TEA6 688 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 KCTD11Q693B1 232 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 IYDQ6PHW0 289 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 ZNF662Q6ZS27 426 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 SLITRK4Q8IW52 837 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 KLHDC8BQ8IXV7 354 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 SFRP1Q8N474 314 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 RASGEF1AQ8N9B8 481 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 OR4K2Q8NGD2 314 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 GDAP1Q8TB36 358 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 NAF1Q96HR8 494 aaKnown RBP14.08□□□□□ -0.16
UBE3B-206ENST00000536398 SLC46A1Q96NT5 459 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 NUDT22Q9BRQ3 303 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 FKBPLQ9UIM3 349 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 DNAJC16Q9Y2G8 782 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 PKP3Q9Y446 797 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 SCN8AQ9UQD0 1980 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 ANKRD11Q6UB99 2663 aaPredicted RBP14.08□□□□□ -0.16
UBE3B-206ENST00000536398 UNC13CQ8NB66 2214 aa14.08□□□□□ -0.16
UBE3B-206ENST00000536398 A0A087WV48 116 aa14.07□□□□□ -0.16
UBE3B-206ENST00000536398 CCDC187A0A096LP49 1063 aa14.07□□□□□ -0.16
UBE3B-206ENST00000536398 DXOO77932 396 aaKnown RBP14.07□□□□□ -0.16
UBE3B-206ENST00000536398 TNFSF15O95150 251 aa14.07□□□□□ -0.16
UBE3B-206ENST00000536398 ZNF7P17097 686 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-206ENST00000536398 LPOP22079 712 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-206ENST00000536398 MPSTP25325 297 aa14.07□□□□□ -0.16
UBE3B-206ENST00000536398 CTSCP53634 463 aa14.07□□□□□ -0.16
UBE3B-206ENST00000536398 TMPRSS15P98073 1019 aa14.07□□□□□ -0.16
UBE3B-206ENST00000536398 CCDC173Q0VFZ6 552 aa14.07□□□□□ -0.16
UBE3B-206ENST00000536398 NFATC2Q13469 925 aa14.07□□□□□ -0.16
UBE3B-206ENST00000536398 PEX6Q13608 980 aa14.07□□□□□ -0.16
UBE3B-206ENST00000536398 SIX1Q15475 284 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-206ENST00000536398 OASLQ15646 514 aaKnown RBP14.07□□□□□ -0.16
UBE3B-206ENST00000536398 SEPT7Q16181 437 aaKnown RBP14.07□□□□□ -0.16
UBE3B-206ENST00000536398 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-206ENST00000536398 ZDHHC20Q5W0Z9 365 aa14.07□□□□□ -0.16
UBE3B-206ENST00000536398 LRRTM4Q86VH4 590 aa14.07□□□□□ -0.16
UBE3B-206ENST00000536398 OR13C4Q8NGS5 318 aa14.07□□□□□ -0.16
UBE3B-206ENST00000536398 WDR36Q8NI36 951 aaKnown RBP14.07□□□□□ -0.16
UBE3B-206ENST00000536398 SNIP1Q8TAD8 396 aaKnown RBP14.07□□□□□ -0.16
UBE3B-206ENST00000536398 ZNF398Q8TD17 642 aa14.07□□□□□ -0.16
UBE3B-206ENST00000536398 BRSK1Q8TDC3 778 aa14.07□□□□□ -0.16
UBE3B-206ENST00000536398 GRAMD1AQ96CP6 724 aa14.07□□□□□ -0.16
UBE3B-206ENST00000536398 CCDC97Q96F63 343 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-206ENST00000536398 LIN37Q96GY3 246 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-206ENST00000536398 ZNF578Q96N58 590 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-206ENST00000536398 OSGEPL1Q9H4B0 414 aa14.07□□□□□ -0.16
UBE3B-206ENST00000536398 FAM96AQ9H5X1 160 aa14.07□□□□□ -0.16
UBE3B-206ENST00000536398 GRPEL1Q9HAV7 217 aa14.07□□□□□ -0.16
UBE3B-206ENST00000536398 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.07□□□□□ -0.16
UBE3B-206ENST00000536398 TMEM9Q9P0T7 183 aa14.07□□□□□ -0.16
UBE3B-206ENST00000536398 PPP2R2CQ9Y2T4 447 aa14.07□□□□□ -0.16
UBE3B-206ENST00000536398 IGHV1OR21-1A0A087WYE8 117 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 PRAMEF33A0A0G2JMD5 474 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 PRR19A6NJB7 356 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 C2orf81A6NN90 581 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms