RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 CARS2Q9HA77 564 aaKnown RBP13.4□□□□□ -0.26
RPAIN-205ENST00000536255 SMOXQ9NWM0 555 aa13.4□□□□□ -0.26
RPAIN-205ENST00000536255 FKBPLQ9UIM3 349 aa13.4□□□□□ -0.26
RPAIN-205ENST00000536255 CNOT6Q9ULM6 557 aaKnown RBP13.4□□□□□ -0.26
RPAIN-205ENST00000536255 DOLKQ9UPQ8 538 aa13.4□□□□□ -0.26
RPAIN-205ENST00000536255 TCAF1Q9Y4C2 921 aa13.4□□□□□ -0.26
RPAIN-205ENST00000536255 MRFAP1Q9Y605 127 aa13.4□□□□□ -0.26
RPAIN-205ENST00000536255 SLC30A1Q9Y6M5 507 aa13.4□□□□□ -0.26
RPAIN-205ENST00000536255 ACACBO00763 2458 aa13.4□□□□□ -0.26
RPAIN-205ENST00000536255 LRP4O75096 1905 aa13.4□□□□□ -0.26
RPAIN-205ENST00000536255 TDRD6O60522 2096 aaKnown RBP13.4□□□□□ -0.27
RPAIN-205ENST00000536255 EFCAB8A8MWE9 144 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 C1QTNF9BB2RNN3 333 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 TMEM63AO94886 807 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 GP1BAP07359 652 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 C1QTNF9P0C862 333 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 PSMA3P25788 255 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 RPIAP49247 311 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 TMPRSS15P98073 1019 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 NFATC2Q13469 925 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 PEX6Q13608 980 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 GTF2H3Q13889 308 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 PTPRCAPQ14761 206 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 MORF4L2Q15014 288 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 NR0B2Q15466 257 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 KCTD19Q17RG1 926 aaPredicted RBP13.39□□□□□ -0.27
RPAIN-205ENST00000536255 GPR33Q49SQ1 333 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 CCDC38Q502W7 563 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 TSTD2Q5T7W7 516 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 IZUMO3Q5VZ72 239 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 SNX20Q7Z614 316 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 TRIM74Q86UV6 250 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 TMPRSS12Q86WS5 348 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 SLC35F3Q8IY50 421 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.39□□□□□ -0.274e-10■■■■■ 86.3
RPAIN-205ENST00000536255 CDKN2AIPNLQ96HQ2 116 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 TTC25Q96NG3 672 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 SERPINB12Q96P63 405 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 TRIM51Q9BSJ1 452 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 TMEM168Q9H0V1 697 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 ASB8Q9H765 288 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 MRM3Q9HC36 420 aaKnown RBP13.39□□□□□ -0.27
RPAIN-205ENST00000536255 TRIM39Q9HCM9 518 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 SAMD15Q9P1V8 674 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 CRLS1Q9UJA2 301 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 SUFUQ9UMX1 484 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 TMEM98Q9Y2Y6 226 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 UTP11Q9Y3A2 253 aaKnown RBP13.39□□□□□ -0.27
RPAIN-205ENST00000536255 FRYQ5TBA9 3013 aa13.39□□□□□ -0.27
RPAIN-205ENST00000536255 MAGEB16A2A368 324 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 CTAGE15A4D2H0 777 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 SDR42E2A6NKP2 422 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 GOLGA8MH3BSY2 632 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 GAPDHSO14556 408 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-205ENST00000536255 RAD51CO43502 376 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 VEGFDO43915 354 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 FUCA1P04066 466 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 CTAGE8P0CG41 777 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 RALBP11234 206 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 IVDP26440 423 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 MGAT1P26572 445 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 MC4RP32245 332 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 GNPDA1P46926 289 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 POLD2P49005 469 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 CLDN6P56747 220 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 PRAMEP78395 509 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 XIAPP98170 497 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 E2F1Q01094 437 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 CACNG1Q06432 222 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 ILF3Q12906 894 aaKnown RBP eCLIP13.38□□□□□ -0.272e-6■■□□□ 12.4
RPAIN-205ENST00000536255 CALCOCO2Q13137 446 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 DNAJC21Q5F1R6 531 aaKnown RBP13.38□□□□□ -0.27
RPAIN-205ENST00000536255 HES3Q5TGS1 186 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 CASC4Q6P4E1 433 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 GUSBP11Q6P575 273 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 AFTPHQ6ULP2 937 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 ZNF534Q76KX8 674 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 TAF8Q7Z7C8 310 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 CTAGE6Q86UF2 777 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 CAND1Q86VP6 1230 aaKnown RBP13.38□□□□□ -0.27
RPAIN-205ENST00000536255 GALNT13Q8IUC8 556 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 CTAGE4Q8IX94 777 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 ARL10Q8N8L6 244 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 DDHD1Q8NEL9 900 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 IFI44Q8TCB0 444 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 HEXDCQ8WVB3 486 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 SCARF2Q96GP6 870 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-205ENST00000536255 OR2M4Q96R27 311 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 TTC1Q99614 292 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 ERP44Q9BS26 406 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 KIFC1Q9BW19 673 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 RAB17Q9H0T7 212 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 SUDS3Q9H7L9 328 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-205ENST00000536255 TRNAU1APQ9NX07 287 aaKnown RBP13.38□□□□□ -0.27
RPAIN-205ENST00000536255 SYBUQ9NX95 663 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 SIRPGQ9P1W8 387 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 GPR34Q9UPC5 381 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 ASPMQ8IZT6 3477 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 AKAP13Q12802 2813 aa13.38□□□□□ -0.27
RPAIN-205ENST00000536255 TPRP12270 2363 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms