RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, human

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-205	ENST00000536107	ST6GALNAC3	Q8NDV1	305 aa		3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	OR6C4	Q8NGE1	309 aa		3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	SCAMP5	Q8TAC9	235 aa		3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	TMEM158	Q8WZ71	300 aa		3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	ARSG	Q96EG1	525 aa		3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	PCED1B	Q96HM7	432 aa		3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	C18orf12	Q96KH6	178 aa		3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	PKMYT1	Q99640	499 aa		3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	CGRRF1	Q99675	332 aa		3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	NAP1L4	Q99733	375 aa	Known RBP	3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	DDA1	Q9BW61	102 aa		3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	ILKAP	Q9H0C8	392 aa	Predicted RBP	3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	RDH14	Q9HBH5	336 aa		3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	CCM2L	Q9NUG4	571 aa	Predicted RBP	3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	GGA2	Q9UJY4	613 aa		3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	PILRA	Q9UKJ1	303 aa		3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	CDH9	Q9ULB4	789 aa		3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	GPR34	Q9UPC5	381 aa		3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	AGAP1	Q9UPQ3	857 aa		3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	CROCC	Q5TZA2	2017 aa		3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	ACAN	P16112	2415 aa		3.99	□□□□□ -1.77
YBX3-205	ENST00000536107	ARGFX	A6NJG6	315 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107		A6NL46	340 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	MDM4	O15151	490 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	OGT	O15294	1046 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	SLC7A4	O43246	635 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	PLRG1	O43660	514 aa	Known RBP	3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	PCDH8	O95206	1070 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	CTSE	P14091	401 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	TSHR	P16473	764 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	ZNF18	P17022	549 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	FDXR	P22570	491 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	LMO2	P25791	158 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	HLA-F	P30511	346 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	CORO1A	P31146	461 aa	Known RBP	3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	CASP14	P31944	242 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	PROK1	P58294	105 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	TFAM	Q00059	246 aa	Known RBP	3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	BIRC2	Q13490	618 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	SEMA5A	Q13591	1074 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	CALCRL	Q16602	461 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	MAN2A1	Q16706	1144 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	PDCD4	Q53EL6	469 aa	Known RBP	3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	MPPE1	Q53F39	396 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	C9orf64	Q5T6V5	341 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	FAM46C	Q5VWP2	391 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	KRTAP5-4	Q6L8H1	288 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	DRICH1	Q6PGQ1	229 aa	Predicted RBP	3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	LINGO4	Q6UY18	593 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	GCNT7	Q6ZNI0	430 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	ADIPOR2	Q86V24	386 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	SFR1	Q86XK3	245 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	DENND1C	Q8IV53	801 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	APLF	Q8IW19	511 aa	Predicted RBP	3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	ESX1	Q8N693	406 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	MYCBPAP	Q8TBZ2	947 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	UBE2Q2	Q8WVN8	375 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	ITLN2	Q8WWU7	325 aa	Predicted RBP	3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	CTRC	Q99895	268 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	MED10	Q9BTT4	135 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	MSTO1	Q9BUK6	570 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	ZNF518B	Q9C0D4	1074 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	CCSER1	Q9C0I3	900 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	ELOVL4	Q9GZR5	314 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	KLK15	Q9H2R5	256 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	SNX25	Q9H3E2	840 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	TLR8	Q9NR97	1041 aa	Known RBP	3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	SLC17A6	Q9P2U8	582 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	DERA	Q9Y315	318 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	PCDHGA9	Q9Y5G4	932 aa	Known RBP	3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	RPS6KL1	Q9Y6S9	549 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	MAP1A	P78559	2803 aa	Predicted RBP	3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	NOTCH1	P46531	2555 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	MYOF	Q9NZM1	2061 aa		3.98	□□□□□ -1.77
YBX3-205	ENST00000536107	KIF26B	Q2KJY2	2108 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	PLXNA2	O75051	1894 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	TRGV8	A0A0C4DH27	118 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	SPTY2D1-AS1	A0A0U1RR47	76 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	EDDM13	A0A1B0GTR0	161 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	TTC34	A8MYJ7	566 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	CLDN5	O00501	218 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	ZW10	O43264	779 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	MED24	O75448	989 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	STK17B	O94768	372 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	CRTAM	O95727	393 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	CPNE6	O95741	557 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	LY6G6D	O95868	133 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	BMP15	O95972	392 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	KLKB1	P03952	638 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	IGKV2-30	P06310	120 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	CELA2A	P08217	269 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	F8A1	P23610	371 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	KRTAP5-9	P26371	169 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	CHML	P26374	656 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	ALDH4A1	P30038	563 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	DGKQ	P52824	942 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	THOP1	P52888	689 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	SLC5A3	P53794	718 aa		3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	SUMO1	P63165	101 aa	Known RBP	3.97	□□□□□ -1.77
YBX3-205	ENST00000536107	KRT83	P78385	493 aa		3.97	□□□□□ -1.77

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