RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 GAS8O95995 478 aa17.67■□□□□ 0.42
DDX55-204ENST00000536079 ADRA1DP25100 572 aa17.67■□□□□ 0.42
DDX55-204ENST00000536079 PDE1BQ01064 536 aa17.67■□□□□ 0.42
DDX55-204ENST00000536079 TMEM115Q12893 351 aaPredicted RBP17.67■□□□□ 0.42
DDX55-204ENST00000536079 PLA2G4EQ3MJ16 856 aa17.67■□□□□ 0.42
DDX55-204ENST00000536079 CCDC157Q569K6 752 aa17.67■□□□□ 0.42
DDX55-204ENST00000536079 SLC30A9Q6PML9 568 aa17.67■□□□□ 0.42
DDX55-204ENST00000536079 GKN2Q86XP6 184 aa17.67■□□□□ 0.42
DDX55-204ENST00000536079 JAMLQ86YT9 394 aa17.67■□□□□ 0.42
DDX55-204ENST00000536079 GALNT13Q8IUC8 556 aa17.67■□□□□ 0.42
DDX55-204ENST00000536079 FAM46DQ8NEK8 389 aa17.67■□□□□ 0.42
DDX55-204ENST00000536079 DDHD1Q8NEL9 900 aa17.67■□□□□ 0.42
DDX55-204ENST00000536079 SPATA4Q8NEY3 305 aa17.67■□□□□ 0.42
DDX55-204ENST00000536079 GDAP1Q8TB36 358 aa17.67■□□□□ 0.42
DDX55-204ENST00000536079 TAAR2Q9P1P5 351 aa17.67■□□□□ 0.42
DDX55-204ENST00000536079 APPL1Q9UKG1 709 aa17.67■□□□□ 0.42
DDX55-204ENST00000536079 GPR34Q9UPC5 381 aa17.67■□□□□ 0.42
DDX55-204ENST00000536079 KCNK6Q9Y257 313 aa17.67■□□□□ 0.42
DDX55-204ENST00000536079 ZNF106Q9H2Y7 1883 aaKnown RBP17.67■□□□□ 0.42
DDX55-204ENST00000536079 PLXNB3Q9ULL4 1909 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 HEATR9A2RTY3 570 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 H7C0S8 307 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 SGTAO43765 313 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 NOBOXO60393 691 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 ALPPL2P10696 532 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 CKMT1AP12532 417 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 ACP5P13686 325 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 CKMT2P17540 419 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 NMBRP28336 390 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 CDK16Q00536 496 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 DR1Q01658 176 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 ITGA9Q13797 1035 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 PCID2Q5JVF3 399 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 ZCCHC8Q6NZY4 707 aaKnown RBP17.66■□□□□ 0.42
DDX55-204ENST00000536079 GUSBP11Q6P575 273 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 CES3Q6UWW8 571 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 CHST15Q7LFX5 561 aaPredicted RBP17.66■□□□□ 0.42
DDX55-204ENST00000536079 C11orf96Q7Z7L8 435 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 PATE1Q8WXA2 126 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 HDAC10Q969S8 669 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 TRIM44Q96DX7 344 aaPredicted RBP17.66■□□□□ 0.42
DDX55-204ENST00000536079 PWWP2AQ96N64 755 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 C19orf43Q9BQ61 176 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 DUSP23Q9BVJ7 150 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 GULP1Q9UBP9 304 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 ASIC3Q9UHC3 531 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 DOLKQ9UPQ8 538 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 WASF3Q9UPY6 502 aa17.66■□□□□ 0.42
DDX55-204ENST00000536079 CACNA1AO00555 2505 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 TRBV5-4A0A0C4DH59 114 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 B4DGG1 531 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 CCDC188H7C350 402 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 DNALI1O14645 258 aaPredicted RBP17.65■□□□□ 0.42
DDX55-204ENST00000536079 TP73O15350 636 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 CDK14O94921 469 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 GOT2P00505 430 aaKnown RBP17.65■□□□□ 0.42
DDX55-204ENST00000536079 SPINK2P20155 84 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 ACP1P24666 158 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 FOXN2P32314 431 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 HADHAP40939 763 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 NPY2RP49146 381 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 ACVR1Q04771 509 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 ZRANB3Q5FWF4 1079 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 OGFOD3Q6PK18 319 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 LVRNQ6Q4G3 990 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 DET1Q7L5Y6 550 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 SNX20Q7Z614 316 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 MARCH9Q86YJ5 346 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 NXPE1Q8N323 547 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 MCUQ8NE86 351 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 GPR156Q8NFN8 814 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 ZNF592Q92610 1267 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 SERPINB12Q96P63 405 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 GSDMCQ9BYG8 508 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 RMI1Q9H9A7 625 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 TREX1Q9NSU2 369 aa17.65■□□□□ 0.42
DDX55-204ENST00000536079 PRR19A6NJB7 356 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 OR2AG2A6NM03 316 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 VEGFDO43915 354 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 ACTR1BP42025 376 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 MAGEA3P43357 314 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 MAZP56270 477 aaKnown RBP17.64■□□□□ 0.41
DDX55-204ENST00000536079 ACTR1AP61163 376 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 DAB2P98082 770 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 ILF3Q12906 894 aaKnown RBP eCLIP17.64■□□□□ 0.416e-7■□□□□ 8.1
DDX55-204ENST00000536079 SEMA3AQ14563 771 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 SMAD1Q15797 465 aaKnown RBP17.64■□□□□ 0.41
DDX55-204ENST00000536079 SKIDA1Q1XH10 827 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 PERM1Q5SV97 790 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 LDLRAP1Q5SW96 308 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 IZUMO3Q5VZ72 239 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 XKR5Q6UX68 686 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 SERPINA9Q86WD7 417 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 PPIL6Q8IXY8 311 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 CHCHD4Q8N4Q1 142 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 BEND7Q8N7W2 519 aaPredicted RBP17.64■□□□□ 0.41
DDX55-204ENST00000536079 PPHLN1Q8NEY8 458 aaKnown RBP17.64■□□□□ 0.41
DDX55-204ENST00000536079 MFSD3Q96ES6 412 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 SGF29Q96ES7 293 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 KIFC1Q9BW19 673 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms