RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 OR6C4Q8NGE1 309 aa16.2■□□□□ 0.18
ATL3-202ENST00000535789 SLC37A2Q8TED4 501 aa16.2■□□□□ 0.18
ATL3-202ENST00000535789 CCDC97Q96F63 343 aaPredicted RBP16.2■□□□□ 0.18
ATL3-202ENST00000535789 VPS35Q96QK1 796 aa16.2■□□□□ 0.18
ATL3-202ENST00000535789 GFM1Q96RP9 751 aaKnown RBP16.2■□□□□ 0.18
ATL3-202ENST00000535789 CARD9Q9H257 536 aa16.2■□□□□ 0.18
ATL3-202ENST00000535789 POLR1BQ9H9Y6 1135 aa16.2■□□□□ 0.18
ATL3-202ENST00000535789 IL26Q9NPH9 171 aa16.2■□□□□ 0.18
ATL3-202ENST00000535789 TBC1D29Q9UFV1 150 aa16.2■□□□□ 0.18
ATL3-202ENST00000535789 SLC23A2Q9UGH3 650 aa16.2■□□□□ 0.18
ATL3-202ENST00000535789 ZNHIT2Q9UHR6 403 aa16.2■□□□□ 0.18
ATL3-202ENST00000535789 KCTD3Q9Y597 815 aa16.2■□□□□ 0.18
ATL3-202ENST00000535789 ARL5AQ9Y689 179 aa16.2■□□□□ 0.18
ATL3-202ENST00000535789 SLC25A14O95258 325 aaPredicted RBP16.19■□□□□ 0.18
ATL3-202ENST00000535789 METTL18O95568 372 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 ITPKBP27987 946 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 EIF2S3P41091 472 aaKnown RBP16.19■□□□□ 0.18
ATL3-202ENST00000535789 LSSP48449 732 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 GEMP55040 296 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 OR1D5P58170 312 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 CFHR1Q03591 330 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 LRP8Q14114 963 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 SPARCL1Q14515 664 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 SIX1Q15475 284 aaPredicted RBP16.19■□□□□ 0.18
ATL3-202ENST00000535789 COL28A1Q2UY09 1125 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 PDPK2PQ6A1A2 396 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 CRTC3Q6UUV7 619 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 C11orf96Q7Z7L8 435 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 ZNF761Q86XN6 746 aaPredicted RBP16.19■□□□□ 0.18
ATL3-202ENST00000535789 SFRP1Q8N474 314 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 FAM71DQ8N9W8 422 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 WDR48Q8TAF3 677 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 LIN37Q96GY3 246 aaPredicted RBP16.19■□□□□ 0.18
ATL3-202ENST00000535789 DCBLD2Q96PD2 775 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 NUDT22Q9BRQ3 303 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 TMEM121Q9BTD3 319 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 FSD1LQ9BXM9 530 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 TLR10Q9BXR5 811 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 TRABDQ9H4I3 376 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 TRIM39Q9HCM9 518 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 JRKLQ9Y4A0 524 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 AHCTF1Q8WYP5 2266 aa16.19■□□□□ 0.18
ATL3-202ENST00000535789 C5orf60A6NFR6 353 aa16.18■□□□□ 0.18
ATL3-202ENST00000535789 GRID2O43424 1007 aa16.18■□□□□ 0.18
ATL3-202ENST00000535789 ANXA9O76027 345 aa16.18■□□□□ 0.18
ATL3-202ENST00000535789 HGFP14210 728 aa16.18■□□□□ 0.18
ATL3-202ENST00000535789 CCKBRP32239 447 aa16.18■□□□□ 0.18
ATL3-202ENST00000535789 SPAM1P38567 509 aa16.18■□□□□ 0.18
ATL3-202ENST00000535789 ZFP36L1Q07352 338 aaKnown RBP16.18■□□□□ 0.18
ATL3-202ENST00000535789 OASLQ15646 514 aaKnown RBP16.18■□□□□ 0.18
ATL3-202ENST00000535789 CHRNA6Q15825 494 aa16.18■□□□□ 0.18
ATL3-202ENST00000535789 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.18■□□□□ 0.18
ATL3-202ENST00000535789 CCDC70Q6NSX1 233 aa16.18■□□□□ 0.18
ATL3-202ENST00000535789 IGF2-ASQ6U949 168 aa16.18■□□□□ 0.18
ATL3-202ENST00000535789 FAM151BQ6UXP7 276 aa16.18■□□□□ 0.18
ATL3-202ENST00000535789 ZNF574Q6ZN55 896 aaPredicted RBP16.18■□□□□ 0.18
ATL3-202ENST00000535789 PHYKPLQ8IUZ5 450 aa16.18■□□□□ 0.18
ATL3-202ENST00000535789 NAT14Q8WUY8 206 aa16.18■□□□□ 0.18
ATL3-202ENST00000535789 HNRNPLLQ8WVV9 542 aaKnown RBP16.18■□□□□ 0.18
ATL3-202ENST00000535789 NAPGQ99747 312 aaPredicted RBP16.18■□□□□ 0.18
ATL3-202ENST00000535789 SEMA6CQ9H3T2 930 aa16.18■□□□□ 0.18
ATL3-202ENST00000535789 RMI1Q9H9A7 625 aa16.18■□□□□ 0.18
ATL3-202ENST00000535789 RDH14Q9HBH5 336 aa16.18■□□□□ 0.18
ATL3-202ENST00000535789 RAD18Q9NS91 495 aa16.18■□□□□ 0.18
ATL3-202ENST00000535789 HACD3Q9P035 362 aa16.18■□□□□ 0.18
ATL3-202ENST00000535789 SCHIP1Q9P0W5 487 aaPredicted RBP16.18■□□□□ 0.18
ATL3-202ENST00000535789 TRBV23OR9-2A0A075B6M9 112 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 CDRT15L2A8MXV6 281 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 UGT1A9O60656 530 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 UGT1A6P19224 532 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 UGT1A1P22309 533 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 UGT1A4P22310 534 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 CASQ1P31415 396 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 UGT1A3P35503 534 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 UGT1A5P35504 534 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 FASLGP48023 281 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 ZNF140P52738 457 aaPredicted RBP16.17■□□□□ 0.18
ATL3-202ENST00000535789 CTSCP53634 463 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 NKAIN2Q5VXU1 208 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 XKR5Q6UX68 686 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 PRUNE1Q86TP1 453 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 OR13C4Q8NGS5 318 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 RTP4Q96DX8 246 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 SRPK1Q96SB4 655 aaKnown RBP16.17■□□□□ 0.18
ATL3-202ENST00000535789 TBL1YQ9BQ87 522 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 UGT1A7Q9HAW7 530 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 UGT1A10Q9HAW8 530 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 UGT1A8Q9HAW9 530 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 EPB41L5Q9HCM4 733 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 PRDM8Q9NQV8 689 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 TMEM9Q9P0T7 183 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 FKBPLQ9UIM3 349 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 PCDHGA8Q9Y5G5 932 aa16.17■□□□□ 0.18
ATL3-202ENST00000535789 CCDC187A0A096LP49 1063 aa16.16■□□□□ 0.18
ATL3-202ENST00000535789 GLYATL1P3A0A0U1RQE8 302 aa16.16■□□□□ 0.18
ATL3-202ENST00000535789 CTAGE9A4FU28 777 aa16.16■□□□□ 0.18
ATL3-202ENST00000535789 AGRPO00253 132 aa16.16■□□□□ 0.18
ATL3-202ENST00000535789 CCL22O00626 93 aa16.16■□□□□ 0.18
ATL3-202ENST00000535789 LIASO43766 372 aa16.16■□□□□ 0.18
ATL3-202ENST00000535789 HOXB3P14651 431 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms