RNA–Protein interactions for RNA: ENST00000535515.5

C12orf56-202, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 3

Gene C12orf56, Length 489 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-202ENST00000535515 HNRNPA1P09651 372 aaKnown RBP eCLIP3.55□□□□□ -1.84
C12orf56-202ENST00000535515 PCNAP12004 261 aa3.55□□□□□ -1.84
C12orf56-202ENST00000535515 CD53P19397 219 aa3.55□□□□□ -1.84
C12orf56-202ENST00000535515 HSD17B4P51659 736 aa3.55□□□□□ -1.84
C12orf56-202ENST00000535515 GALNT2Q10471 571 aa3.55□□□□□ -1.84
C12orf56-202ENST00000535515 PPP2R5BQ15173 497 aa3.55□□□□□ -1.84
C12orf56-202ENST00000535515 ZNF766Q5HY98 468 aa3.55□□□□□ -1.84
C12orf56-202ENST00000535515 FOXRED2Q8IWF2 684 aa3.55□□□□□ -1.84
C12orf56-202ENST00000535515 ODF3L1Q8IXM7 274 aa3.55□□□□□ -1.84
C12orf56-202ENST00000535515 TNIP2Q8NFZ5 429 aa3.55□□□□□ -1.84
C12orf56-202ENST00000535515 FAM76AQ8TAV0 307 aa3.55□□□□□ -1.84
C12orf56-202ENST00000535515 PABPC5Q96DU9 382 aaKnown RBP3.55□□□□□ -1.84
C12orf56-202ENST00000535515 GUCD1Q96NT3 240 aa3.55□□□□□ -1.84
C12orf56-202ENST00000535515 F2RL3Q96RI0 385 aa3.55□□□□□ -1.84
C12orf56-202ENST00000535515 HAUS8Q9BT25 410 aa3.55□□□□□ -1.84
C12orf56-202ENST00000535515 ESRP2Q9H6T0 727 aaKnown RBP3.55□□□□□ -1.84
C12orf56-202ENST00000535515 C17orf75Q9HAS0 396 aa3.55□□□□□ -1.84
C12orf56-202ENST00000535515 SMYD2Q9NRG4 433 aa3.55□□□□□ -1.84
C12orf56-202ENST00000535515 SAGE1Q9NXZ1 904 aa3.55□□□□□ -1.84
C12orf56-202ENST00000535515 CNOT7Q9UIV1 285 aaKnown RBP3.55□□□□□ -1.84
C12orf56-202ENST00000535515 TINAGQ9UJW2 476 aa3.55□□□□□ -1.84
C12orf56-202ENST00000535515 CARD8Q9Y2G2 431 aa3.55□□□□□ -1.84
C12orf56-202ENST00000535515 LSM4Q9Y4Z0 139 aaKnown RBP3.55□□□□□ -1.84
C12orf56-202ENST00000535515 COL14A1Q05707 1796 aaKnown RBP3.55□□□□□ -1.84
C12orf56-202ENST00000535515 SCN11AQ9UI33 1791 aa3.55□□□□□ -1.84
C12orf56-202ENST00000535515 TP53BP1Q12888 1972 aaPredicted RBP3.54□□□□□ -1.84
C12orf56-202ENST00000535515 KIF15Q9NS87 1388 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 MYO5BQ9ULV0 1848 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 PDS5AQ29RF7 1337 aaKnown RBP3.54□□□□□ -1.84
C12orf56-202ENST00000535515 NPHP3Q7Z494 1330 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 USP24Q9UPU5 2620 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 BPTFQ12830 3046 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 TEX13CA0A0J9YWL9 993 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 TNPO2O14787 897 aaKnown RBP3.54□□□□□ -1.84
C12orf56-202ENST00000535515 LDLRAD4O15165 306 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 HLA-DOBP13765 273 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 CD58P19256 250 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 PITX1P78337 314 aaPredicted RBP3.54□□□□□ -1.84
C12orf56-202ENST00000535515 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.54□□□□□ -1.84
C12orf56-202ENST00000535515 C2orf68Q2NKX9 166 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 SGO1Q5FBB7 561 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 ARHGAP11AQ6P4F7 1023 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 LCTLQ6UWM7 567 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 SLC36A4Q6YBV0 504 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 MTSS1LQ765P7 747 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 ANKRD18AQ8IVF6 992 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.54□□□□□ -1.84
C12orf56-202ENST00000535515 ZCCHC9Q8N567 271 aaKnown RBP3.54□□□□□ -1.84
C12orf56-202ENST00000535515 SLC24A4Q8NFF2 622 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 MAGEC3Q8TD91 643 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 DUSP19Q8WTR2 217 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 ANKRD9Q96BM1 317 aaPredicted RBP3.54□□□□□ -1.84
C12orf56-202ENST00000535515 CDCA5Q96FF9 252 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 KLHL15Q96M94 604 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 ZNF570Q96NI8 536 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 SCLT1Q96NL6 688 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 CSTL1Q9H114 145 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 KCNN2Q9H2S1 579 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 PCDH9Q9HC56 1237 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 MAGEE1Q9HCI5 957 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 CNGB3Q9NQW8 809 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 LUZP4Q9P127 313 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 RCOR1Q9UKL0 485 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 NCOR2Q9Y618 2525 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 TAF1P21675 1872 aa3.54□□□□□ -1.84
C12orf56-202ENST00000535515 ASPMQ8IZT6 3477 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 TIAM2Q8IVF5 1701 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 PARP4Q9UKK3 1724 aaKnown RBP3.53□□□□□ -1.84
C12orf56-202ENST00000535515 QRICH2Q9H0J4 1663 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 RRN3P2A6NIE6 340 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 HEXAP06865 529 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 AGAP20933 346 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 CHATP28329 748 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 ALDH4A1P30038 563 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 SHMT1P34896 483 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 DDIT3P35638 169 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 MAP2K2P36507 400 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 MAPK9P45984 424 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 UFM1P61960 85 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 RPP30P78346 268 aaKnown RBP3.53□□□□□ -1.84
C12orf56-202ENST00000535515 SLC9B1Q4ZJI4 515 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 GFRALQ6UXV0 394 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 CYP26C1Q6V0L0 522 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 LRRC8DQ7L1W4 858 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 TMTC1Q8IUR5 882 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 ZBTB2Q8N680 514 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 CNBD1Q8NA66 436 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 OR2AK2Q8NG84 335 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 BBS10Q8TAM1 723 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 FBXL8Q96CD0 374 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 KIF1BPQ96EK5 621 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 ALG14Q96F25 216 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 HNRNPABQ99729 332 aaKnown RBP3.53□□□□□ -1.84
C12orf56-202ENST00000535515 LITAFQ99732 161 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 PLEKHA5Q9HAU0 1116 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 BPIFA1Q9NP55 256 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 MKKSQ9NPJ1 570 aaPredicted RBP3.53□□□□□ -1.84
C12orf56-202ENST00000535515 BEX4Q9NWD9 120 aaPredicted RBP3.53□□□□□ -1.84
C12orf56-202ENST00000535515 FAM96BQ9Y3D0 163 aa3.53□□□□□ -1.84
C12orf56-202ENST00000535515 OVOS2A0A0G2JMS6 1433 aa3.53□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms