RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 NUDT4Q9NZJ9 180 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 ABI3Q9P2A4 366 aa18.06■□□□□ 0.48
SFSWAP-203ENST00000535236 LDOC1O95751 146 aaPredicted RBP18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 HKDC1Q2TB90 917 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 TMPRSS11AQ6ZMR5 421 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 LRRC17Q8N6Y2 441 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 GPR21Q99679 349 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 TCF25Q9BQ70 676 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 PCDHA2Q9Y5H9 948 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 KRT36O76013 467 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 IPO13O94829 963 aaKnown RBP18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 FSBPO95073 299 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 POP4O95707 220 aaKnown RBP18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 PRKAR1AP10644 381 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 CLUP10909 449 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 CLCNKBP51801 687 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 SP2Q02086 613 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 MYBPC3Q14896 1274 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 LCN9Q8WX39 176 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 TAPBPLQ9BX59 468 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 PDZD7Q9H5P4 517 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 CNOT6Q9ULM6 557 aaKnown RBP18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 NRP2O60462 931 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 PRAMEF1O95521 474 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 COL6A2P12110 1019 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 CCNCP24863 283 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 NR1H2P55055 460 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 MED27Q6P2C8 311 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 MREGQ8N565 214 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 DQX1Q8TE96 717 aaKnown RBP18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 FAM84AQ96KN4 292 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 IL12RB2Q99665 862 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 DEPDC5O75140 1603 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 A0A1B0GVM2 712 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 A0A1W2PPM1 405 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 TCAF2A6NFQ2 919 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 SEPT4O43236 478 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 SASH3O75995 380 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 BPGMP07738 259 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 SLC35G6P0C7Q6 338 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 OGNP20774 298 aaKnown RBP18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 KCNA5P22460 613 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 POLR2JP52435 117 aaKnown RBP18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 DSC2Q02487 901 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 GNA12Q03113 381 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 IRF2BP2Q7Z5L9 587 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 CPSF7Q8N684 471 aaKnown RBP18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 ING3Q9NXR8 418 aa18.05■□□□□ 0.48
SFSWAP-203ENST00000535236 MSL3Q8N5Y2 521 aaKnown RBP18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 ZNF483Q8TF39 744 aaPredicted RBP18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 RTKNQ9BST9 563 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 ATG10Q9H0Y0 220 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 GBA3Q9H227 469 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 FAM237AA0A1B0GTK4 181 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 IQCF5A8MTL0 148 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 CASKO14936 926 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 TSPAN1O60635 241 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 UGT2B11O75310 529 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 TCF4P15884 667 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 BCAP31P51572 246 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 STXBP1P61764 594 aaKnown RBP18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 SLC4A11Q8NBS3 891 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 RNF31Q96EP0 1072 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 JSRP1Q96MG2 331 aaPredicted RBP18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 HEPHQ9BQS7 1158 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 ALKBH4Q9NXW9 302 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 ROBO3Q96MS0 1386 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 C2P06681 752 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 ALPPL2P10696 532 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 MPSTP25325 297 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 RPIAP49247 311 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 RIPK1Q13546 671 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 ECM1Q16610 540 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 ESRP1Q6NXG1 681 aaKnown RBP18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 GK5Q6ZS86 529 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 PARP8Q8N3A8 854 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 POLMQ9NP87 494 aaPredicted RBP18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 ANXA4P09525 319 aaPredicted RBP18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 TM4SF1P30408 202 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 FAUP35544 74 aaKnown RBP18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 GAD2Q05329 585 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 TBC1D21Q8IYX1 336 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 KBTBD7Q8WVZ9 684 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 GTF2IRD1Q9UHL9 959 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 HBS1LQ9Y450 684 aaKnown RBP18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 PTDSS1P48651 473 aaKnown RBP18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 STARP49675 285 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 PDX1P52945 283 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 GALNT7Q86SF2 657 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 TSEN15Q8WW01 171 aaKnown RBP18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 ACBD6Q9BR61 282 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 IPPKQ9H8X2 491 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 MAP4K5Q9Y4K4 846 aa18.04■□□□□ 0.48
SFSWAP-203ENST00000535236 IFNA6P05013 189 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 ZBTB48P10074 688 aaPredicted RBP18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 MAPK12P53778 367 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 PCDH1Q08174 1060 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 SLC38A3Q99624 504 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 CIDEBQ9UHD4 219 aa18.03■□□□□ 0.48
SFSWAP-203ENST00000535236 DCLK1O15075 740 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms