RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	PIGH	Q14442	188 aa	Predicted RBP	11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	PTPRR	Q15256	657 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	ANKS6	Q68DC2	871 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	CLEC18B	Q6UXF7	455 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	CEACAM20	Q6UY09	585 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	GALNT13	Q8IUC8	556 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	CCDC170	Q8IYT3	715 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	NLGN4X	Q8N0W4	816 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	ATPAF2	Q8N5M1	289 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	NIPA2	Q8N8Q9	360 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	CLEC18C	Q8NCF0	446 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	FAM71B	Q8TC56	605 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	SLC37A2	Q8TED4	501 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	SCAMP4	Q969E2	229 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	KIAA1143	Q96AT1	154 aa	Predicted RBP	11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	AHCYL2	Q96HN2	611 aa	Known RBP	11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	C16orf45	Q96MC5	204 aa	Predicted RBP	11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	LYSMD1	Q96S90	227 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	SLC38A3	Q99624	504 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	RMI1	Q9H9A7	625 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	RPL26L1	Q9UNX3	145 aa	Known RBP	11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	PPP2R2C	Q9Y2T4	447 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	KIR2DS5	A0A0G2JLQ3	304 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647		A0A0G2JNG1	304 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	RGSL1	A5PLK6	1076 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647		A6NCN8	305 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	GOLGA6C	A6NDK9	693 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	GOLGA6B	A6NDN3	693 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	TMEM229A	B2RXF0	380 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	KIR2DS3	K7RE56	304 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	NKX2-8	O15522	239 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	PRL	P01236	227 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	ANKRD34C	P0C6C1	535 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	GOLGA6D	P0CG33	693 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	SLC2A4	P14672	509 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	CTPS1	P17812	591 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	IL4R	P24394	825 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	CLCNKA	P51800	687 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	MC1R	Q01726	317 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	HHEX	Q03014	270 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	UBAP2L	Q14157	1087 aa	Known RBP	11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	IHH	Q14623	411 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	KIR2DS5	Q14953	304 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	DOK6	Q6PKX4	331 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	RAD9B	Q6WBX8	426 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	RFLNA	Q6ZTI6	216 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	FAM129C	Q86XR2	697 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	AVL9	Q8NBF6	648 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	APOBEC4	Q8WW27	367 aa	Known RBP	11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	MAML1	Q92585	1016 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	SYN2	Q92777	582 aa	Predicted RBP	11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	ZNF653	Q96CK0	615 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	CCDC42	Q96M95	316 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	TSGA13	Q96PP4	275 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	AGAP2	Q99490	1192 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	HERPUD2	Q9BSE4	406 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	RIOK2	Q9BVS4	552 aa	Known RBP	11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	POLR1E	Q9GZS1	481 aa	Known RBP	11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	EPN3	Q9H201	632 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	DEF6	Q9H4E7	631 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	PCDH18	Q9HCL0	1135 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	GOLGA6A	Q9NYA3	693 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	CD84	Q9UIB8	345 aa		11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	CNOT6	Q9ULM6	557 aa	Known RBP	11.43	□□□□□ -0.58
CTNND1-238	ENST00000534647	LRRK2	Q5S007	2527 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647		A0A0U1RQS6	177 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	LOC101059948	A0A1B0GTJ6	334 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	OR5K4	A6NMS3	321 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	USP27X	A6NNY8	438 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	MATN3	O15232	486 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	MAP3K6	O95382	1288 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	EML2	O95834	649 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	DLGAP3	O95886	979 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	NTRK1	P04629	796 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	TCF4	P15884	667 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	HNRNPH3	P31942	346 aa	Known RBP	11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	ASIC2	Q16515	512 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	SMTNL2	Q2TAL5	461 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	TDRD12	Q587J7	1177 aa	Known RBP	11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	COX20	Q5RI15	118 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	LYSMD3	Q7Z3D4	306 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	TIPARP	Q7Z3E1	657 aa	Known RBP	11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	SLC9B2	Q86UD5	537 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	PTRH1	Q86Y79	214 aa	Known RBP	11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	TXLNB	Q8N3L3	684 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	C9orf43	Q8TAL5	461 aa	Predicted RBP	11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	ARRDC2	Q8TBH0	407 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	UBE2Q2	Q8WVN8	375 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	HSPH1	Q92598	858 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	WDR24	Q96S15	920 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	DESI2	Q9BSY9	194 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	TDRD1	Q9BXT4	1180 aa	Known RBP	11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	STN1	Q9H668	368 aa	Known RBP	11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	UCK1	Q9HA47	277 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	NT5M	Q9NPB1	228 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	HAUS2	Q9NVX0	235 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms