RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 CTBSQ01459 385 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 ELOCQ15369 112 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 C6orf132Q5T0Z8 1188 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 N4BP2L1Q5TBK1 243 aaPredicted RBP13.86□□□□□ -0.19
VPS11-205ENST00000534551 ZDHHC20Q5W0Z9 365 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 PDPK2PQ6A1A2 396 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 GUSBP11Q6P575 273 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 LRRC8BQ6P9F7 803 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 TAF8Q7Z7C8 310 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 ZNF547Q8IVP9 402 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 PIANPQ8IYJ0 282 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 BEND7Q8N7W2 519 aaPredicted RBP13.86□□□□□ -0.19
VPS11-205ENST00000534551 RASGEF1AQ8N9B8 481 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 DDHD1Q8NEL9 900 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 PPHLN1Q8NEY8 458 aaKnown RBP13.86□□□□□ -0.19
VPS11-205ENST00000534551 ZNF398Q8TD17 642 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 PATE1Q8WXA2 126 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 CDKN2AIPNLQ96HQ2 116 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 RANBP9Q96S59 729 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 BOCQ9BWV1 1114 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 CHRAC1Q9NRG0 131 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 SMOXQ9NWM0 555 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 IL1RAPL1Q9NZN1 696 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 VPS18Q9P253 973 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 ZNHIT2Q9UHR6 403 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 CRLS1Q9UJA2 301 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 DOLKQ9UPQ8 538 aa13.86□□□□□ -0.19
VPS11-205ENST00000534551 HEATR9A2RTY3 570 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 OR2AG2A6NM03 316 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 NUAK1O60285 661 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 PPFIA2O75334 1257 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 GOT2P00505 430 aaKnown RBP13.85□□□□□ -0.19
VPS11-205ENST00000534551 FTH1P19P0C7X4 201 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 ITGALP20701 1170 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 ADRA1DP25100 572 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 FOXN2P32314 431 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 ACTR1BP42025 376 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 ACTR1AP61163 376 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 ITGA9Q13797 1035 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 SEMA3AQ14563 771 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 ZRANB3Q5FWF4 1079 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 CHST15Q7LFX5 561 aaPredicted RBP13.85□□□□□ -0.19
VPS11-205ENST00000534551 TRAPPC5Q8IUR0 188 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 FSTL5Q8N475 847 aaPredicted RBP13.85□□□□□ -0.19
VPS11-205ENST00000534551 HDAC10Q969S8 669 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 MFSD3Q96ES6 412 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 TRIM39Q9HCM9 518 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 SPATS2LQ9NUQ6 558 aaKnown RBP13.85□□□□□ -0.19
VPS11-205ENST00000534551 RNF14Q9UBS8 474 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 SLC23A2Q9UGH3 650 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 CDC23Q9UJX2 597 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 GPR34Q9UPC5 381 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 DNAJC16Q9Y2G8 782 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 CSNK1G3Q9Y6M4 447 aa13.85□□□□□ -0.19
VPS11-205ENST00000534551 NEMP2A6NFY4 417 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 H7C0S8 307 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 TP73O15350 636 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 GRID2O43424 1007 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 SGTAO43765 313 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 NOBOXO60393 691 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 ALPPL2P10696 532 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 SPINK2P20155 84 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 ARNTP27540 789 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 HADHAP40939 763 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 MAGEA3P43357 314 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 RPL21P46778 160 aaKnown RBP13.84□□□□□ -0.19
VPS11-205ENST00000534551 MAZP56270 477 aaKnown RBP13.84□□□□□ -0.19
VPS11-205ENST00000534551 DAB2P98082 770 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 PDE1BQ01064 536 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 TMEM115Q12893 351 aaPredicted RBP13.84□□□□□ -0.19
VPS11-205ENST00000534551 ILF3Q12906 894 aaKnown RBP eCLIP13.84□□□□□ -0.19
VPS11-205ENST00000534551 DBN1Q16643 649 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 MSS51Q4VC12 460 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 ZCCHC8Q6NZY4 707 aaKnown RBP13.84□□□□□ -0.19
VPS11-205ENST00000534551 SNX20Q7Z614 316 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 GLRX5Q86SX6 157 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 LDB1Q86U70 411 aaPredicted RBP13.84□□□□□ -0.19
VPS11-205ENST00000534551 SERPINA9Q86WD7 417 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 GKN2Q86XP6 184 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 MARCH9Q86YJ5 346 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 PPIL6Q8IXY8 311 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 NXPE1Q8N323 547 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 FAM46DQ8NEK8 389 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 GPBAR1Q8TDU6 330 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 CDC6Q99741 560 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 IL22Q9GZX6 179 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 DPH5Q9H2P9 285 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 TREX1Q9NSU2 369 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 TRNAU1APQ9NX07 287 aaKnown RBP13.84□□□□□ -0.19
VPS11-205ENST00000534551 TAAR2Q9P1P5 351 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 MARCH4Q9P2E8 410 aaPredicted RBP13.84□□□□□ -0.19
VPS11-205ENST00000534551 GULP1Q9UBP9 304 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 FAM8A1Q9UBU6 413 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 APPL1Q9UKG1 709 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 MRFAP1Q9Y605 127 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 SLC30A1Q9Y6M5 507 aa13.84□□□□□ -0.19
VPS11-205ENST00000534551 TRBV5-4A0A0C4DH59 114 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 AGAP14A8MT82 685 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 GOLGA8KD6RF30 607 aa13.83□□□□□ -0.2
VPS11-205ENST00000534551 GOLGA8TH3BQL2 631 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms