RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 PCDHB11Q9Y5F2 797 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 NAV1Q8NEY1 1877 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 CNOT3O75175 753 aaKnown RBP11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 PIGNO95427 931 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 ETS1P14921 441 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 PSMB9P28065 219 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 FASTKQ14296 549 aaKnown RBP11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 FUT11Q495W5 492 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 TBCELQ5QJ74 424 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 UBXN11Q5T124 520 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 MSANTD2Q6P1R3 559 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 SNX20Q7Z614 316 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 MMAAQ8IVH4 418 aaKnown RBP11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 AADATQ8N5Z0 425 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 OR6Y1Q8NGX8 325 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 ACE2Q9BYF1 805 aaPredicted RBP11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 KRT84Q9NSB2 600 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 CROTQ9UKG9 612 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 BIRC5O15392 142 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 CYP11A1P05108 521 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 TRAF2Q12933 501 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 DGUOKQ16854 277 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 MYLK3Q32MK0 819 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 PACS1Q6VY07 963 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 CIR1Q86X95 450 aaPredicted RBP11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 TCEAL8Q8IYN2 117 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 C19orf18Q8NEA5 215 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 C1orf74Q96LT6 269 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 NDNQ99608 321 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 REXO4Q9GZR2 422 aaKnown RBP11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 SPHK2Q9NRA0 654 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 SEMA3GQ9NS98 782 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 PRKAG3Q9UGI9 489 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 SORCS3Q9UPU3 1222 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 PPEF2O14830 753 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 HGFP14210 728 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 GJA1P17302 382 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 STXBP1P61764 594 aaKnown RBP11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 KCNJ2P63252 427 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 DGKKQ5KSL6 1271 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 DUPD1Q68J44 220 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 C22orf39Q6P5X5 142 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 CAPSLQ8WWF8 208 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 SRMSQ9H3Y6 488 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 GJD2Q9UKL4 321 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 KLHL20Q9Y2M5 609 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 PI15O43692 258 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 CHRNB2P17787 502 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 BUD31P41223 144 aaPredicted RBP11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 CRADDP78560 199 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 NDUFA5Q16718 116 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 TMEM220Q6QAJ8 160 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 ZNF567Q8N184 647 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 SLC39A11Q8N1S5 342 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 FOXJ1Q92949 421 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 C19orf60Q96EN9 201 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 KCTD14Q9BQ13 255 aaPredicted RBP11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 GPR62Q9BZJ7 368 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 CLEC4MQ9H2X3 399 aaPredicted RBP11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 NMUR1Q9HB89 426 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 SPATA2Q9UM82 520 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 C9J4A7 227 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 SNPHO15079 494 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 KDELR3O43731 214 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 LILRB3O75022 631 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 MAT2AP31153 395 aaKnown RBP11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 ACTR1BP42025 376 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 ACTR1AP61163 376 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 RPP38P78345 283 aaKnown RBP11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 RFTN2Q52LD8 501 aaPredicted RBP11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 ARSIQ5FYB1 569 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 TCHHL1Q5QJ38 904 aaPredicted RBP11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 KIAA0930Q6ICG6 404 aaPredicted RBP11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 SERPINA9Q86WD7 417 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 CFAP206Q8IYR0 622 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 TTLQ8NG68 377 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 SIX2Q9NPC8 291 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 MIOSQ9NXC5 875 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 SIX4Q9UIU6 781 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 COL18A1P39060 1754 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 HEPACAM2A8MVW5 462 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 PDE9AO76083 593 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 ABCB1P08183 1280 aaPredicted RBP11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 SRPRAP08240 638 aaKnown RBP11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 HOXB6P17509 224 aaKnown RBP11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 AVPR1BP47901 424 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 PTPN5P54829 565 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 NR1H2P55055 460 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 TOMM20Q15388 145 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 SPANXN2Q5MJ10 180 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 NSMCE2Q96MF7 247 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 ZNF641Q96N77 438 aaPredicted RBP11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 OSBPL6Q9BZF3 934 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 CRTAC1Q9NQ79 661 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 CDH7Q9ULB5 785 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 ZNF487B1APH4 448 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 STK16O75716 305 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 ZNF682O95780 498 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 TBX18O95935 607 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 ASMTP46597 345 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms