RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 SLC30A1Q9Y6M5 507 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 SYCE1LA8MT33 242 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 SNX2O60749 519 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 TULP3O75386 442 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 CNTN5O94779 1100 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 ESRRBO95718 433 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 EPOP01588 193 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 CCNA2P20248 432 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 UGT1A1P22309 533 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 UGT1A4P22310 534 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 PAX3P23760 479 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 UGT1A3P35503 534 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 UGT1A5P35504 534 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 POLR2IP36954 125 aaKnown RBP16.49■□□□□ 0.23
CTSB-228ENST00000533455 YAP1P46937 504 aaKnown RBP16.49■□□□□ 0.23
CTSB-228ENST00000533455 ALDH3A2P51648 485 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 ECT2LQ008S8 904 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 BNIP3Q12983 259 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 FUT11Q495W5 492 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 SETMARQ53H47 684 aaPredicted RBP16.49■□□□□ 0.23
CTSB-228ENST00000533455 PYCR3Q53H96 274 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 ALFQ53S48 1182 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 MS4A13Q5J8X5 152 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 XKR5Q6UX68 686 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 SPATA2LQ8IUW3 424 aaPredicted RBP16.49■□□□□ 0.23
CTSB-228ENST00000533455 THEM5Q8N1Q8 247 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 SFRP1Q8N474 314 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 DPP10Q8N608 796 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 ZBTB8BQ8NAP8 495 aaPredicted RBP16.49■□□□□ 0.23
CTSB-228ENST00000533455 OR13C4Q8NGS5 318 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 BRSK1Q8TDC3 778 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 RSPH1Q8WYR4 309 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 MS4A4AQ96JQ5 239 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 RPL10LQ96L21 214 aaKnown RBP16.49■□□□□ 0.23
CTSB-228ENST00000533455 LRRC3Q9BY71 257 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 NTN4Q9HB63 628 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 PFDN4Q9NQP4 134 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 INTS7Q9NVH2 962 aaKnown RBP16.49■□□□□ 0.23
CTSB-228ENST00000533455 GNPTGQ9UJJ9 305 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 IKZF3Q9UKT9 509 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 TIMM22Q9Y584 194 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 PCDHGA11Q9Y5H2 935 aa16.49■□□□□ 0.23
CTSB-228ENST00000533455 M0QZ92 97 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 UPK1AO00322 258 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 B3GAT3O94766 335 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 CHEK2O96017 543 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 ZNF865P0CJ78 1059 aaPredicted RBP16.48■□□□□ 0.23
CTSB-228ENST00000533455 GRIK1P39086 918 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 TTC3P53804 2025 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 ARSFP54793 590 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 OR4D2P58180 307 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 PHEXP78562 749 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 DAG1Q14118 895 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 PTPRCAPQ14761 206 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 PLCL1Q15111 1095 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 PAN2Q504Q3 1202 aaKnown RBP16.48■□□□□ 0.23
CTSB-228ENST00000533455 BROXQ5VW32 411 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 TXNDC11Q6PKC3 985 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 PAQR3Q6TCH7 311 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 DCDC5Q6ZRR9 648 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 FAM43BQ6ZT52 329 aaPredicted RBP16.48■□□□□ 0.23
CTSB-228ENST00000533455 ZFAND4Q86XD8 727 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 HID1Q8IV36 788 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 BLOC1S5Q8TDH9 187 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 NSMCE2Q96MF7 247 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 TDRD1Q9BXT4 1180 aaKnown RBP16.48■□□□□ 0.23
CTSB-228ENST00000533455 SLAMF8Q9P0V8 285 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 SUN2Q9UH99 717 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 PCTPQ9UKL6 214 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 USP22Q9UPT9 525 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 MED16Q9Y2X0 877 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 RHOBTB1O94844 696 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 ZBTB11O95625 1053 aaPredicted RBP16.48■□□□□ 0.23
CTSB-228ENST00000533455 MLYCDO95822 493 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 HPRP00739 348 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 TFPTP0C1Z6 253 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 PORP16435 677 aaPredicted RBP16.48■□□□□ 0.23
CTSB-228ENST00000533455 MATN1P21941 496 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 IL12AP29459 219 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 SHMT2P34897 504 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 PBX3P40426 434 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 TBX4P57082 545 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 RAD51Q06609 339 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 TIGD2Q4W5G0 525 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 OR2T11Q8NH01 316 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 TRUB1Q8WWH5 349 aaKnown RBP16.48■□□□□ 0.23
CTSB-228ENST00000533455 FUBP1Q96AE4 644 aaKnown RBP16.48■□□□□ 0.23
CTSB-228ENST00000533455 SEPHS2Q99611 448 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 SEMA3CQ99985 751 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 POLR1EQ9GZS1 481 aaKnown RBP16.48■□□□□ 0.23
CTSB-228ENST00000533455 GPN2Q9H9Y4 310 aaPredicted RBP16.48■□□□□ 0.23
CTSB-228ENST00000533455 TAS2R13Q9NYV9 303 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 ZNF225Q9UK10 706 aa16.48■□□□□ 0.23
CTSB-228ENST00000533455 CCL15-CCL14A0A0B4J2E2 113 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 BOLA2-SMG1P6H3BVE0 249 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 KPNA6O60684 536 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 ABCB7O75027 752 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 ATP6V1G1O75348 118 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 DEAF1O75398 565 aaPredicted RBP16.47■□□□□ 0.23
CTSB-228ENST00000533455 MT-ND1P03886 318 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms