RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 MSI1O43347 362 aaKnown RBP5.48□□□□□ -1.53
CD44-236ENST00000533222 HCRTR2O43614 444 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 BUB1O43683 1085 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 SNAP91O60641 907 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 NBNO60934 754 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 ZNF623O75123 536 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 TMEM127O75204 238 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 GCATO75600 419 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 SOAT2O75908 522 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 SOX30O94993 753 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 SEMA3DO95025 777 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 GCNT3O95395 438 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 LY86O95711 162 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 LDOC1O95751 146 aaPredicted RBP5.48□□□□□ -1.53
CD44-236ENST00000533222 AGTP01019 485 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 POLBP06746 335 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 GJB1P08034 283 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 SERPINF2P08697 491 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 HBQ1P09105 142 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 NUDT17P0C025 328 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 SMIM6P0DI80 62 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 MYBL1P10243 752 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 GAAP10253 952 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 HSPD1P10809 573 aaKnown RBP5.48□□□□□ -1.53
CD44-236ENST00000533222 SRCP12931 536 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 S100PP25815 95 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 RBL1P28749 1068 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 CYP2C18P33260 490 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 RFC2P35250 354 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 UGT1A3P35503 534 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 CYLC1P35663 651 aaPredicted RBP5.48□□□□□ -1.53
CD44-236ENST00000533222 SLC15A1P46059 708 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 CRKLP46109 303 aaKnown RBP5.48□□□□□ -1.53
CD44-236ENST00000533222 MEOX1P50221 254 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 CASP5P51878 434 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 PLK1P53350 603 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 SLC18A1P54219 525 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 HNRNPKP61978 463 aaKnown RBP eCLIP5.48□□□□□ -1.53
CD44-236ENST00000533222 UBE3AQ05086 875 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 BFSP1Q12934 665 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 NFYCQ13952 458 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 CAMK1Q14012 370 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 KRT31Q15323 416 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 TAF12Q16514 161 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 SGCAQ16586 387 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 HADHQ16836 314 aaKnown RBP5.48□□□□□ -1.53
CD44-236ENST00000533222 ALG11Q2TAA5 492 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 EIF2S3LQ2VIR3 472 aaKnown RBP5.48□□□□□ -1.53
CD44-236ENST00000533222 MINDY4Q4G0A6 757 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 ZMAT1Q5H9K5 638 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 MPP7Q5T2T1 576 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 BEND3Q5T5X7 828 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 RIPPLY2Q5TAB7 128 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 UGT3A1Q6NUS8 523 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 VITQ6UXI7 678 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 DSG4Q86SJ6 1040 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 TAC4Q86UU9 113 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 SATL1Q86VE3 508 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 C2CD5Q86YS7 1000 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 SIAH1Q8IUQ4 282 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 TTC5Q8N0Z6 440 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 ICA1LQ8NDH6 482 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 OR8K5Q8NH50 307 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 TTC8Q8TAM2 541 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 HM13Q8TCT9 377 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 ACTRT2Q8TDY3 377 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 AUTS2Q8WXX7 1259 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 DPF2Q92785 391 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 LPPQ93052 612 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 C18orf8Q96DM3 657 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 ZNF597Q96LX8 424 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 TEKT5Q96M29 485 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 NSMCE2Q96MF7 247 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 RIPOR3Q96MK2 946 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 ASB2Q96Q27 587 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 PLEKHF1Q96S99 279 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 ZNF347Q96SE7 839 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 CDK5RAP1Q96SZ6 601 aaKnown RBP5.48□□□□□ -1.53
CD44-236ENST00000533222 AGAP2Q99490 1192 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 NUP88Q99567 741 aaPredicted RBP5.48□□□□□ -1.53
CD44-236ENST00000533222 RTKNQ9BST9 563 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 OR10A2Q9H208 303 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 TP63Q9H3D4 680 aaPredicted RBP5.48□□□□□ -1.53
CD44-236ENST00000533222 SYNDIG1Q9H7V2 258 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 LRRC40Q9H9A6 602 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 ZNF556Q9HAH1 456 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 SIAEQ9HAT2 523 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 PARD6AQ9NPB6 346 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 IL26Q9NPH9 171 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 DMRT3Q9NQL9 472 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 OLA1Q9NTK5 396 aaKnown RBP5.48□□□□□ -1.53
CD44-236ENST00000533222 FBXO28Q9NVF7 368 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 CMTM6Q9NX76 183 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 PKD2L2Q9NZM6 624 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 EPHA6Q9UF33 1036 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 SRP68Q9UHB9 627 aaKnown RBP5.48□□□□□ -1.53
CD44-236ENST00000533222 TRPS1Q9UHF7 1281 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 CNOT11Q9UKZ1 510 aaKnown RBP5.48□□□□□ -1.53
CD44-236ENST00000533222 KCNK7Q9Y2U2 307 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 MFHAS1Q9Y4C4 1052 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms