RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 AURKAO14965 403 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 STX7O15400 261 aaKnown RBP12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 GRIA1P42261 906 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 CLDN6P56747 220 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 DCDC1P59894 354 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 ILF3Q12906 894 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 KCNJ11Q14654 390 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 TAF1AQ15573 450 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 CERCAMQ5T4B2 595 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 ANKRD22Q5VYY1 191 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 ALS2CLQ60I27 953 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 TAF8Q7Z7C8 310 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 C17orf82Q86X59 251 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 DTX3LQ8TDB6 740 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 BRSK1Q8TDC3 778 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 EID2BQ96D98 161 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 SNF8Q96H20 258 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 RIOK2Q9BVS4 552 aaKnown RBP12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 CARD6Q9BX69 1037 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 RAB17Q9H0T7 212 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 DPH5Q9H2P9 285 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 CARS2Q9HA77 564 aaKnown RBP12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 ARNT2Q9HBZ2 717 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 BFARQ9NZS9 450 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 VPS18Q9P253 973 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 APPL1Q9UKG1 709 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 ARL5AQ9Y689 179 aa12.83□□□□□ -0.36
TRAPPC4-212ENST00000533058 CCDC78A2IDD5 438 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 NOBOXO60393 691 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 LPOP22079 712 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 PDE1BQ01064 536 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 CYP4F3Q08477 520 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 LAMB3Q13751 1172 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 LRP8Q14114 963 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 CCDC38Q502W7 563 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 PERM1Q5SV97 790 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 PDPK2PQ6A1A2 396 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 CASC4Q6P4E1 433 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 NRROSQ86YC3 692 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 TTC30BQ8N4P2 665 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 KYQ8NBH2 561 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 FAM46DQ8NEK8 389 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 PPHLN1Q8NEY8 458 aaKnown RBP12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 CCL4L1Q8NHW4 92 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 MDM1Q8TC05 714 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 AGAP2Q99490 1192 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 CCDC3Q9BQI4 270 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 SPATA16Q9BXB7 569 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 RMI1Q9H9A7 625 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 CASS4Q9NQ75 786 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 GULP1Q9UBP9 304 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 MOSPD1Q9UJG1 213 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 ANAPC5Q9UJX4 755 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 CNOT6Q9ULM6 557 aaKnown RBP12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 SUFUQ9UMX1 484 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 SNX24Q9Y343 169 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 KCTD3Q9Y597 815 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 ASXL3Q9C0F0 2248 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 LRP4O75096 1905 aa12.82□□□□□ -0.36
TRAPPC4-212ENST00000533058 APC2O95996 2303 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 ACACAQ13085 2346 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 HEATR9A2RTY3 570 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 GPR89AB7ZAQ6 455 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 NDC80O14777 642 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 NUDT21O43809 227 aaKnown RBP12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 TMEM63AO94886 807 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 GPR89BP0CG08 455 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 GLB1P16278 677 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 BPIP17213 487 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 MGAT1P26572 445 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 HMGCLP35914 325 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 MAGEA6P43360 314 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 NPY2RP49146 381 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 TMPRSS15P98073 1019 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 SLC7A5Q01650 507 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 CALCOCO2Q13137 446 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 HLTFQ14527 1009 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 ISXQ2M1V0 245 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 C14orf28Q4W4Y0 310 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 PYCR3Q53H96 274 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 RNASEH2BQ5TBB1 312 aaKnown RBP12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 LRRC8BQ6P9F7 803 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 IGF2-ASQ6U949 168 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 RBM44Q6ZP01 1051 aaKnown RBP12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 LSMEM2Q8N112 164 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 TRAM1L1Q8N609 369 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 BBOF1Q8ND07 529 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 OR4K2Q8NGD2 314 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 OR2M4Q96R27 311 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 ERP44Q9BS26 406 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 ZSCAN5AQ9BUG6 496 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 DPEP2Q9H4A9 486 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 XAB2Q9HCS7 855 aaKnown RBP12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 SAMD15Q9P1V8 674 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 FREM2Q5SZK8 3169 aa12.81□□□□□ -0.36
TRAPPC4-212ENST00000533058 DMXL2Q8TDJ6 3036 aa12.8□□□□□ -0.36
TRAPPC4-212ENST00000533058 TMX2-CTNND1H3BSU7 103 aa12.8□□□□□ -0.36
TRAPPC4-212ENST00000533058 DNAJC6O75061 913 aa12.8□□□□□ -0.36
TRAPPC4-212ENST00000533058 AVILO75366 819 aa12.8□□□□□ -0.36
TRAPPC4-212ENST00000533058 CSO75390 466 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms