RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 CD1CP29017 333 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 TLE3Q04726 772 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 ANKRD20A2Q5SQ80 823 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 ANKRD20A1Q5TYW2 823 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 ANKRD20A3Q5VUR7 823 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 IYDQ6PHW0 289 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 SFRP1Q8N474 314 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 TTC13Q8NBP0 860 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 GDAP1Q8TB36 358 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 SLC37A2Q8TED4 501 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 SH3KBP1Q96B97 665 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 AHCYL2Q96HN2 611 aaKnown RBP17.03■□□□□ 0.32
PHRF1-204ENST00000532550 VPS35Q96QK1 796 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 FAM118BQ9BPY3 351 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 SEMA6CQ9H3T2 930 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 KLC4Q9NSK0 619 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 TRIM10Q9UDY6 481 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 TBC1D29Q9UFV1 150 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 PKP3Q9Y446 797 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 LOXL2Q9Y4K0 774 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 ITPR1Q14643 2758 aa17.03■□□□□ 0.32
PHRF1-204ENST00000532550 NBEAQ8NFP9 2946 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 OR5K4A6NMS3 321 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 AGRPO00253 132 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 KMOO15229 486 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 PPFIA2O75334 1257 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 EML2O95834 649 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 HGFP14210 728 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 FASLGP48023 281 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 CLCNKAP51800 687 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 SQSTM1Q13501 440 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 ATP13A5Q4VNC0 1218 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 NKAIN2Q5VXU1 208 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 TMPRSS9Q7Z410 1059 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 CLEC14AQ86T13 490 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 SLC9B2Q86UD5 537 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 LRRTM4Q86VH4 590 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 JAMLQ86YT9 394 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 SLITRK4Q8IW52 837 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 TTC30BQ8N4P2 665 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 RNF10Q8N5U6 811 aaKnown RBP17.02■□□□□ 0.32
PHRF1-204ENST00000532550 DTX3LQ8TDB6 740 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 BRSK1Q8TDC3 778 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 LRRC45Q96CN5 670 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 TTC25Q96NG3 672 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 DPYSL5Q9BPU6 564 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 FICDQ9BVA6 458 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 PRORYQ9H606 182 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 IL26Q9NPH9 171 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.02■□□□□ 0.32
PHRF1-204ENST00000532550 IL17CQ9P0M4 197 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 PISDQ9UG56 409 aa17.02■□□□□ 0.32
PHRF1-204ENST00000532550 PACSIN2Q9UNF0 486 aaPredicted RBP17.02■□□□□ 0.32
PHRF1-204ENST00000532550 IGHV1OR21-1A0A087WYE8 117 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 KIR2DS5A0A0G2JLQ3 304 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 A0A0G2JNG1 304 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 A0A0U1RQJ8 604 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 KIR2DS3K7RE56 304 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 CHUKO15111 745 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 STX7O15400 261 aaKnown RBP17.01■□□□□ 0.31
PHRF1-204ENST00000532550 MTX2O75431 263 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 FTCDO95954 541 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 F3P13726 295 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 SLC5A2P31639 672 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 SPAM1P38567 509 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 UCNP55089 124 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 GSDMDP57764 484 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 GPLD1P80108 840 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 HHEXQ03014 270 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 TMEM115Q12893 351 aaPredicted RBP17.01■□□□□ 0.31
PHRF1-204ENST00000532550 GTF2H3Q13889 308 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 KIR2DS5Q14953 304 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 INSCQ1MX18 579 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 CRTC3Q6UUV7 619 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 ZNF574Q6ZN55 896 aaPredicted RBP17.01■□□□□ 0.31
PHRF1-204ENST00000532550 OR10G6Q8NH81 332 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 FCRL3Q96P31 734 aaPredicted RBP17.01■□□□□ 0.31
PHRF1-204ENST00000532550 PPP1R2P1Q96PQ5 205 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 NUDT22Q9BRQ3 303 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 ZMYND15Q9H091 742 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 OSGEPL1Q9H4B0 414 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 SARS2Q9NP81 518 aaKnown RBP17.01■□□□□ 0.31
PHRF1-204ENST00000532550 PRDM8Q9NQV8 689 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 PCDHGA7Q9Y5G6 932 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 ADGRG1Q9Y653 693 aa17.01■□□□□ 0.31
PHRF1-204ENST00000532550 IGHV5-10-1A0A0J9YXX1 117 aa17■□□□□ 0.31
PHRF1-204ENST00000532550 GLYATL1P3A0A0U1RQE8 302 aa17■□□□□ 0.31
PHRF1-204ENST00000532550 C2orf81A6NN90 581 aa17■□□□□ 0.31
PHRF1-204ENST00000532550 DDX3YO15523 660 aaKnown RBP17■□□□□ 0.31
PHRF1-204ENST00000532550 BUD23O43709 281 aaKnown RBP17■□□□□ 0.31
PHRF1-204ENST00000532550 UGT1A9O60656 530 aa17■□□□□ 0.31
PHRF1-204ENST00000532550 ZNF7P17097 686 aaPredicted RBP17■□□□□ 0.31
PHRF1-204ENST00000532550 UGT1A6P19224 532 aa17■□□□□ 0.31
PHRF1-204ENST00000532550 UGT1A1P22309 533 aa17■□□□□ 0.31
PHRF1-204ENST00000532550 UGT1A4P22310 534 aa17■□□□□ 0.31
PHRF1-204ENST00000532550 PSMB4P28070 264 aa17■□□□□ 0.31
PHRF1-204ENST00000532550 UGT1A3P35503 534 aa17■□□□□ 0.31
PHRF1-204ENST00000532550 LIMK2P53671 638 aa17■□□□□ 0.31
PHRF1-204ENST00000532550 MAPK10P53779 464 aa17■□□□□ 0.31
PHRF1-204ENST00000532550 CXADRP78310 365 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms