RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 GTF2H3Q13889 308 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 SQLEQ14534 574 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 FAM102AQ5T9C2 384 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 IDO2Q6ZQW0 420 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 GK5Q6ZS86 529 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 ERMP1Q7Z2K6 904 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 PIWIL3Q7Z3Z3 882 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 DSG4Q86SJ6 1040 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 SPPL2CQ8IUH8 684 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 BBS7Q8IWZ6 715 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 EID3Q8N140 333 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 RYBPQ8N488 228 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF540Q8NDQ6 660 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 ASZ1Q8WWH4 475 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 FAM162AQ96A26 154 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 HSFY1Q96LI6 401 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 COLEC11Q9BWP8 271 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 ROGDIQ9GZN7 287 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 NIF3L1Q9GZT8 377 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 NAA50Q9GZZ1 169 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 MIR1-1HGQ9H1L0 117 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 COMMD8Q9NX08 183 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 KLHL8Q9P2G9 620 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 SAE1Q9UBE0 346 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 MLXQ9UH92 298 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 RIMS3Q9UJD0 308 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 AJAP1Q9UKB5 411 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 KAT6AQ92794 2004 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 A0A0G2JPF8 293 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 ZBTB42B2RXF5 422 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 HNRNPCL3B7ZW38 293 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 PLK4O00444 970 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 SLC22A2O15244 555 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 CHADO15335 359 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 NRP2O60462 931 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 OR2B3O76000 313 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 RSL1D1O76021 490 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 FKBP9O95302 570 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 CD4P01730 458 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 HNRNPCL4P0DMR1 293 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 MBL2P11226 248 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 IGFBP6P24592 240 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 CASP3P42574 277 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 PPM1FP49593 454 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 SCN1BQ07699 218 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 BST2Q10589 180 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 CSTF3Q12996 717 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 IL18R1Q13478 541 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 DDR2Q16832 855 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 FAM83EQ2M2I3 478 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF404Q494X3 552 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 TPRG1LQ5T0D9 272 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 AGAP6Q5VW22 663 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 ANKRD22Q5VYY1 191 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 DENND1BQ6P3S1 775 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF276Q8N554 614 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 PJA1Q8NG27 643 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 RNF139Q8WU17 664 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 PTCD2Q8WV60 388 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 NKD2Q969F2 451 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 AGAP4Q96P64 663 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 NT5C1AQ9BXI3 368 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 PIF1Q9H611 641 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 CATSPERZQ9NTU4 200 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 DNAJC11Q9NVH1 559 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 SMOXQ9NWM0 555 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 MIOSQ9NXC5 875 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 TAS2R9Q9NYW1 312 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 SNX7Q9UNH6 387 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 RAD54BQ9Y620 910 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 SBF1O95248 1867 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 AIREO43918 545 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 GPIP06744 558 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 CD48P09326 243 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 PRKCAP17252 672 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 MYF6P23409 242 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 CD40LGP29965 261 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 ETV1P50549 477 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 PTP4A2Q12974 167 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 UGP2Q16851 508 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 ALFQ53S48 1182 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 DESI1Q6ICB0 168 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 ARSKQ6UWY0 536 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 SLC51BQ86UW2 128 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 SNX29P2Q8IUI4 249 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 CAMKK1Q8N5S9 505 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 C1orf127Q8N9H9 656 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 SLC2A14Q8TDB8 520 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 ZFP90Q8TF47 636 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 CGRRF1Q99675 332 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 PSD2Q9BQI7 771 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 SEZ6LQ9BYH1 1024 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 DCSTAMPQ9H295 470 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 SLC6A15Q9H2J7 730 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 ADAMTS10Q9H324 1103 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 TMLHEQ9NVH6 421 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 THG1LQ9NWX6 298 aaKnown RBP6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 ADAM30Q9UKF2 790 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 STON1Q9Y6Q2 735 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 EFCAB9A8MZ26 197 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms