RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 IGSF9Q9P2J2 1179 aa7.9□□□□□ -1.15
CTNND1-230ENST00000532245 ATP6AP2A0A1C7CYW4 349 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 ATP6AP2O75787 350 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 UMPSP11172 480 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 CTGFP29279 349 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 GABRB2P47870 512 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 HSPA7P48741 367 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 CLK3P49761 638 aaKnown RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 CSTF1Q05048 431 aaKnown RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 C1orf61Q13536 156 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 LPCAT2Q7L5N7 544 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 CYGBQ8WWM9 190 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 MRPL38Q96DV4 380 aaKnown RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 BORCS6Q96GS4 357 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 ZNF514Q96K75 400 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 DPYSL5Q9BPU6 564 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 RERGLQ9H628 205 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 LRRC4CQ9HCJ2 640 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 PAK6Q9NQU5 681 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 PLK4O00444 970 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 RNGTTO60942 597 aaKnown RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 STK16O75716 305 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 SLC35G6P0C7Q6 338 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 LBPP18428 481 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 SEPHS1P49903 392 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 PLOD1Q02809 727 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 ZBTB17Q13105 803 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 PDE1CQ14123 709 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 ZNF460Q14592 562 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 FASTKD3Q14CZ7 662 aaKnown RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 SLC1A5Q15758 541 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 PIK3R6Q5UE93 754 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 CYP2U1Q7Z449 544 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 APCDD1Q8J025 514 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 CMASQ8NFW8 434 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 OR9Q1Q8NGQ5 310 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 AENQ8WTP8 325 aaKnown RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 ZNF75CPQ92670 426 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 NXNL1Q96CM4 212 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 FZD3Q9NPG1 666 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 STOML1Q9UBI4 398 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 GTF2A1LQ9UNN4 478 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 MTF2Q9Y483 593 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 MYO1CO00159 1063 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 C2P06681 752 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 CD70P32970 193 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 TERF2Q15554 542 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 ZNF805Q5CZA5 627 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 C1orf220Q5T0J3 134 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 GALNT4Q8N4A0 578 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 SPPL3Q8TCT6 385 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 BTN2A2Q8WVV5 523 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 PEBP4Q96S96 227 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 AGAP2Q99490 1192 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 BRINP2Q9C0B6 783 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 KLHL25Q9H0H3 589 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 FNIP2Q9P278 1114 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 A0A1W2PQU0 124 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 K7ERQ8 282 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 POP7O75817 140 aaKnown RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 EPN2O95208 641 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 TSHRP16473 764 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 PSMA4P25789 261 aaKnown RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 CSTF2P33240 577 aaKnown RBP eCLIP7.89□□□□□ -1.151e-7■■□□□ 12.3
CTNND1-230ENST00000532245 IRS1P35568 1242 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 IRAK1P51617 712 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 RPS21P63220 83 aaKnown RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 SLC25A11Q02978 314 aaKnown RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 CHRNB3Q05901 458 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 MED21Q13503 144 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 GPAT3Q53EU6 434 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 Q6ZVL8 140 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 KBTBD6Q86V97 674 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 TMEM139Q8IV31 216 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 C1orf74Q96LT6 269 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 MRPS30Q9NP92 439 aaKnown RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 CYTH4Q9UIA0 394 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 CDV3Q9UKY7 258 aaKnown RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 PPIEQ9UNP9 301 aaKnown RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 STON1Q9Y6Q2 735 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 LCHNA4D1U4 455 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 KRT87PA6NCN2 255 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 SLC28A1O00337 649 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 GMFGO60234 142 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 ESR1P03372 595 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 TYRP1P17643 537 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 MLLT3P42568 568 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 ARCN1P48444 511 aaKnown RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 COPZ1P61923 177 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 OLIG2Q13516 323 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 ATP13A5Q4VNC0 1218 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 PPM1JQ5JR12 505 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 CCNYL2Q5T2Q4 361 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 C16orf62Q7Z3J2 963 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 LMO3Q8TAP4 145 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 ZDHHC3Q9NYG2 299 aa7.89□□□□□ -1.15
CTNND1-230ENST00000532245 DNMT3BQ9UBC3 853 aaKnown RBP7.89□□□□□ -1.15
CTNND1-230ENST00000532245 DCXO43602 365 aa7.88□□□□□ -1.15
CTNND1-230ENST00000532245 ZNF30P17039 623 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms