RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 DGKAP23743 735 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 CA5AP35218 305 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 TMEM115Q12893 351 aaPredicted RBP22.04■■□□□ 1.12
LRRK1-208ENST00000532029 ELOCQ15369 112 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 INAVAQ3KP66 663 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 ANKRD20A4Q4UJ75 823 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 MSS51Q4VC12 460 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 KIAA0930Q6ICG6 404 aaPredicted RBP22.04■■□□□ 1.12
LRRK1-208ENST00000532029 SERPINA9Q86WD7 417 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 AGGF1Q8N302 714 aaeCLIP22.04■■□□□ 1.12
LRRK1-208ENST00000532029 FSTL5Q8N475 847 aaPredicted RBP22.04■■□□□ 1.12
LRRK1-208ENST00000532029 ZNF548Q8NEK5 533 aaPredicted RBP22.04■■□□□ 1.12
LRRK1-208ENST00000532029 HEXDCQ8WVB3 486 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 ART4Q93070 314 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 LRRC39Q96DD0 335 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 DCUN1D1Q96GG9 259 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 SCARF2Q96GP6 870 aaPredicted RBP22.04■■□□□ 1.12
LRRK1-208ENST00000532029 OR2M4Q96R27 311 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 TTC1Q99614 292 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 COPS8Q99627 209 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 EBNA1BP2Q99848 306 aaKnown RBP22.04■■□□□ 1.12
LRRK1-208ENST00000532029 NAT9Q9BTE0 207 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 LRRC61Q9BV99 259 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 EPB41L5Q9HCM4 733 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 FAM114A2Q9NRY5 505 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 ZNHIT2Q9UHR6 403 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 GPSM3Q9Y4H4 160 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 NEMP2A6NFY4 417 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 CFAP99D6REC4 459 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 NUAK1O60285 661 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 DNAJC6O75061 913 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 BANF1O75531 89 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 USP1O94782 785 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 VAPBO95292 243 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 RALBP11234 206 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 ZNF8P17098 575 aaPredicted RBP22.03■■□□□ 1.12
LRRK1-208ENST00000532029 FOXN2P32314 431 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 CDKN1CP49918 316 aaPredicted RBP22.03■■□□□ 1.12
LRRK1-208ENST00000532029 PDIA2Q13087 525 aaKnown RBP22.03■■□□□ 1.12
LRRK1-208ENST00000532029 C1orf61Q13536 156 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 KHDC1Q4VXA5 237 aaKnown RBP22.03■■□□□ 1.12
LRRK1-208ENST00000532029 PSAPL1Q6NUJ1 521 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 MICALCLQ6ZW33 695 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 CENPUQ71F23 418 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 TMEM135Q86UB9 458 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 CCNJLQ8IV13 435 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 OTUD6BQ8N6M0 293 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 SEC14L1Q92503 715 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 SGSM3Q96HU1 749 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 TRIM56Q9BRZ2 755 aaKnown RBP22.03■■□□□ 1.12
LRRK1-208ENST00000532029 CAAP1Q9H8G2 361 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 CATSPERZQ9NTU4 200 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 ZDHHC3Q9NYG2 299 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 DMGDHQ9UI17 866 aaKnown RBP22.03■■□□□ 1.12
LRRK1-208ENST00000532029 CDV3Q9UKY7 258 aaKnown RBP22.03■■□□□ 1.12
LRRK1-208ENST00000532029 DOLKQ9UPQ8 538 aa22.03■■□□□ 1.12
LRRK1-208ENST00000532029 RIF1Q5UIP0 2472 aaKnown RBP22.02■■□□□ 1.12
LRRK1-208ENST00000532029 FAM186AA6NE01 2351 aa22.02■■□□□ 1.12
LRRK1-208ENST00000532029 TRBV5-4A0A0C4DH59 114 aa22.02■■□□□ 1.12
LRRK1-208ENST00000532029 FLRT2O43155 660 aa22.02■■□□□ 1.12
LRRK1-208ENST00000532029 GRID2O43424 1007 aa22.02■■□□□ 1.12
LRRK1-208ENST00000532029 TTC4O95801 387 aa22.02■■□□□ 1.12
LRRK1-208ENST00000532029 FUCA1P04066 466 aa22.02■■□□□ 1.12
LRRK1-208ENST00000532029 PRSS56P0CW18 603 aa22.02■■□□□ 1.12
LRRK1-208ENST00000532029 ACRV1P26436 265 aa22.02■■□□□ 1.12
LRRK1-208ENST00000532029 PPARGP37231 505 aaPredicted RBP22.02■■□□□ 1.12
LRRK1-208ENST00000532029 ELK3P41970 407 aa22.02■■□□□ 1.12
LRRK1-208ENST00000532029 ILF3Q12906 894 aaKnown RBP eCLIP22.02■■□□□ 1.12
LRRK1-208ENST00000532029 TCEA2Q15560 299 aa22.02■■□□□ 1.12
LRRK1-208ENST00000532029 TRADDQ15628 312 aa22.02■■□□□ 1.12
LRRK1-208ENST00000532029 PYCR3Q53H96 274 aa22.02■■□□□ 1.12
LRRK1-208ENST00000532029 AARS2Q5JTZ9 985 aaKnown RBP22.02■■□□□ 1.12
LRRK1-208ENST00000532029 LYPLAL1Q5VWZ2 237 aa22.02■■□□□ 1.12
LRRK1-208ENST00000532029 PIANPQ8IYJ0 282 aa22.02■■□□□ 1.12
LRRK1-208ENST00000532029 FBXO25Q8TCJ0 367 aa22.02■■□□□ 1.12
LRRK1-208ENST00000532029 SETD7Q8WTS6 366 aaKnown RBP22.02■■□□□ 1.12
LRRK1-208ENST00000532029 FCRL3Q96P31 734 aaPredicted RBP22.02■■□□□ 1.12
LRRK1-208ENST00000532029 TMEM168Q9H0V1 697 aa22.02■■□□□ 1.12
LRRK1-208ENST00000532029 UCKL1Q9NWZ5 548 aa22.02■■□□□ 1.12
LRRK1-208ENST00000532029 TRNAU1APQ9NX07 287 aaKnown RBP22.02■■□□□ 1.12
LRRK1-208ENST00000532029 CHMP2BQ9UQN3 213 aa22.02■■□□□ 1.12
LRRK1-208ENST00000532029 CSNK1G3Q9Y6M4 447 aa22.02■■□□□ 1.12
LRRK1-208ENST00000532029 EIF3HO15372 352 aaKnown RBP eCLIP22.01■■□□□ 1.11
LRRK1-208ENST00000532029 ALPPL2P10696 532 aa22.01■■□□□ 1.11
LRRK1-208ENST00000532029 CD59P13987 128 aa22.01■■□□□ 1.11
LRRK1-208ENST00000532029 DBN1Q16643 649 aa22.01■■□□□ 1.11
LRRK1-208ENST00000532029 HP1BP3Q5SSJ5 553 aaPredicted RBP22.01■■□□□ 1.11
LRRK1-208ENST00000532029 CRTC3Q6UUV7 619 aa22.01■■□□□ 1.11
LRRK1-208ENST00000532029 CERS6Q6ZMG9 384 aa22.01■■□□□ 1.11
LRRK1-208ENST00000532029 KANSL1Q7Z3B3 1105 aa22.01■■□□□ 1.11
LRRK1-208ENST00000532029 LRRTM4Q86VH4 590 aa22.01■■□□□ 1.11
LRRK1-208ENST00000532029 GKN2Q86XP6 184 aa22.01■■□□□ 1.11
LRRK1-208ENST00000532029 SLC25A45Q8N413 288 aa22.01■■□□□ 1.11
LRRK1-208ENST00000532029 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.01■■□□□ 1.11
LRRK1-208ENST00000532029 FOXP3Q9BZS1 431 aa22.01■■□□□ 1.11
LRRK1-208ENST00000532029 ZC3H7BQ9UGR2 993 aaKnown RBP22.01■■□□□ 1.11
LRRK1-208ENST00000532029 PRKAB1Q9Y478 270 aa22.01■■□□□ 1.11
LRRK1-208ENST00000532029 E7ESA3 106 aa22■■□□□ 1.11
LRRK1-208ENST00000532029 CHUKO15111 745 aa22■■□□□ 1.11
LRRK1-208ENST00000532029 CD3EAPO15446 510 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms