RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	NKAIN1	Q4KMZ8	207 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TMEM196	Q5HYL7	178 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967		Q5PR19	223 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	SPRYD7	Q5W111	196 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TBC1D9B	Q66K14	1250 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ATG9B	Q674R7	924 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CLEC9A	Q6UXN8	241 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	DPP8	Q6V1X1	898 aa	Predicted RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	GSTA5	Q7RTV2	222 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	NRROS	Q86YC3	692 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	BPIFC	Q8NFQ6	507 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	OR56B1	Q8NGI3	324 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	SUN3	Q8TAQ9	357 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	BSCL2	Q96G97	398 aa	Predicted RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	C16orf58	Q96GQ5	468 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	FAM71F1	Q96KD3	344 aa	Predicted RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	RPGRIP1	Q96KN7	1286 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	COQ7	Q99807	217 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	MYOC	Q99972	504 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ABHD6	Q9BV23	337 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ACSS3	Q9H6R3	686 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	AZI2	Q9H6S1	392 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	NOL11	Q9H8H0	719 aa	Known RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	SLC39A2	Q9NP94	309 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TMEM161A	Q9NX61	479 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	JKAMP	Q9P055	326 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	EMC3	Q9P0I2	261 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	KLHL8	Q9P2G9	620 aa	Predicted RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PLA2G4C	Q9UP65	541 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	EXO1	Q9UQ84	846 aa	Known RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ATP6V1D	Q9Y5K8	247 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TOPBP1	Q92547	1522 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PTPN23	Q9H3S7	1636 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	POLA1	P09884	1462 aa	Predicted RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TBC1D3D	A0A087WVF3	549 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TBC1D3I	A0A087WXS9	549 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TBC1D3E	A0A087X179	549 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TBC1D3K	A0A087X1G2	549 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ERICH2	A1L162	156 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	SLC35F4	A4IF30	521 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TBC1D3B	A6NDS4	549 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TBC1D3F	A6NER0	549 aa	Predicted RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TBC1D3L	B9A6J9	549 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TEX33	O43247	280 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	OPN1LW	P04000	364 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PGK2	P07205	417 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TBC1D3H	P0C7X1	549 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	HGF	P14210	728 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ATF2	P15336	505 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ELN	P15502	786 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	RAB6A	P20340	208 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	FDXR	P22570	491 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	AKT2	P31751	481 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CETN2	P41208	172 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	MTNR1A	P48039	350 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ME1	P48163	572 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	GATM	P50440	423 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PTTG1IP	P53801	180 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	RPL15	P61313	204 aa	Known RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ASPH	Q12797	758 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	BTG3	Q14201	252 aa	Predicted RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	HSP90AA4P	Q58FG1	418 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	RALGPS1	Q5JS13	557 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	LDLRAP1	Q5SW96	308 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TBC1D3G	Q6DHY5	549 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TBC1D3C	Q6IPX1	549 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	KDM7A	Q6ZMT4	941 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	RNF111	Q6ZNA4	994 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	SEPT14	Q6ZU15	432 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	USP30	Q70CQ3	517 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	FAM219A	Q8IW50	185 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TBC1D3	Q8IZP1	549 aa	Predicted RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	C12orf50	Q8NA57	414 aa	Predicted RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	HJURP	Q8NCD3	748 aa	Predicted RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	RAB3IL1	Q8TBN0	382 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	POC1B	Q8TC44	478 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	FIG4	Q92562	907 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ZNF837	Q96EG3	531 aa	Predicted RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ZNF668	Q96K58	619 aa	Predicted RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	LRRC37B	Q96QE4	947 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	HIST1H2AA	Q96QV6	131 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PKIB	Q9C010	78 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	EGLN1	Q9GZT9	426 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	SRD5A3	Q9H8P0	318 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TREM1	Q9NP99	234 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	MRPS18A	Q9NVS2	196 aa	Known RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	DBF4	Q9UBU7	674 aa	Predicted RBP	5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	HESX1	Q9UBX0	185 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	UBQLN2	Q9UHD9	624 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CBY1	Q9Y3M2	126 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	SAMD9	Q5K651	1589 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	UACA	Q9BZF9	1416 aa		5.2	□□□□□ -1.58
ECHDC1-222	ENST00000531967	LAMC3	Q9Y6N6	1575 aa		5.19	□□□□□ -1.58
ECHDC1-222	ENST00000531967		A0A0U1RQJ8	604 aa		5.19	□□□□□ -1.58
ECHDC1-222	ENST00000531967	HELT	A6NFD8	242 aa		5.19	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ALOX15B	O15296	676 aa		5.19	□□□□□ -1.58
ECHDC1-222	ENST00000531967	AKR7A2	O43488	359 aa		5.19	□□□□□ -1.58
ECHDC1-222	ENST00000531967	HCRTR2	O43614	444 aa		5.19	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ARSA	P15289	507 aa		5.19	□□□□□ -1.58

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