RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 KNSTRNQ9Y448 316 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 CLIC4Q9Y696 253 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 POMT1Q9Y6A1 747 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 ZNF335Q9H4Z2 1342 aaPredicted RBP4.41□□□□□ -1.7
USP47-211ENST00000531513 GPRASP1Q5JY77 1395 aa4.4□□□□□ -1.7
USP47-211ENST00000531513 KIR2DS5A0A0G2JLQ3 304 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 IGLV5-39A0A0G2JS06 123 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 ARHGEF37A1IGU5 675 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 H0YAE9 185 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 KIR2DS3K7RE56 304 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 PRPF4O43172 522 aaKnown RBP eCLIP4.4□□□□□ -1.71
USP47-211ENST00000531513 RSL1D1O76021 490 aaKnown RBP4.4□□□□□ -1.71
USP47-211ENST00000531513 RGS11O94810 467 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 TRUB2O95900 331 aaKnown RBP4.4□□□□□ -1.71
USP47-211ENST00000531513 MYZAPP0CAP1 466 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 CHATP28329 748 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 TNFSF8P32971 234 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 ATP6V1E1P36543 226 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 HNF4AP41235 474 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 FAM27E3Q08E93 113 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 ZNF273Q14593 569 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 PNLIPRP3Q17RR3 467 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 C6orf163Q5TEZ5 329 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 SIGIRRQ6IA17 410 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 USP43Q70EL4 1123 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 FAM57BQ71RH2 274 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 TRILQ7L0X0 811 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 DPPA4Q7L190 304 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 ADIPOR2Q86V24 386 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 RBFAQ8N0V3 343 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 HORMAD2Q8N7B1 307 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 NAT8LQ8N9F0 302 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.4□□□□□ -1.71
USP47-211ENST00000531513 CAMKVQ8NCB2 501 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 RBM15BQ8NDT2 890 aaKnown RBP4.4□□□□□ -1.71
USP47-211ENST00000531513 CFAP61Q8NHU2 1237 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 B4GALNT2Q8NHY0 566 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 MGARPQ8TDB4 240 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 KCNE4Q8WWG9 221 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 PTP4A1Q93096 173 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 SNX21Q969T3 373 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 CCDC114Q96M63 670 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 NLRP4Q96MN2 994 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 DACH2Q96NX9 599 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 PCGF1Q9BSM1 259 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 LHPPQ9H008 270 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 KCNK15Q9H427 330 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 MRPL44Q9H9J2 332 aaKnown RBP4.4□□□□□ -1.71
USP47-211ENST00000531513 EPB41L5Q9HCM4 733 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 GPR108Q9NPR9 543 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 PIH1D3Q9NQM4 214 aaKnown RBP4.4□□□□□ -1.71
USP47-211ENST00000531513 UBA2Q9UBT2 640 aaPredicted RBP4.4□□□□□ -1.71
USP47-211ENST00000531513 IL17BQ9UHF5 180 aa4.4□□□□□ -1.71
USP47-211ENST00000531513 NOTCH4Q99466 2003 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 A0A0U1RQK1 487 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 ZNF320A2RRD8 509 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 OR6C76A6NM76 312 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 DNM1LO00429 736 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 VCYO14598 125 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 SMAD9O15198 467 aaKnown RBP4.39□□□□□ -1.71
USP47-211ENST00000531513 IPO8O15397 1037 aaKnown RBP4.39□□□□□ -1.71
USP47-211ENST00000531513 TLX3O43711 291 aaPredicted RBP4.39□□□□□ -1.71
USP47-211ENST00000531513 STX6O43752 255 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 KRT86O43790 486 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 PENKP01210 267 aaPredicted RBP4.39□□□□□ -1.71
USP47-211ENST00000531513 ICAM1P05362 532 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 GJA1P17302 382 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 TCEA1P23193 301 aaKnown RBP4.39□□□□□ -1.71
USP47-211ENST00000531513 MT3P25713 68 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 HOXC9P31274 260 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 DCTDP32321 178 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 ALDH3A2P51648 485 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 BMXP51813 675 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 SIRPAP78324 504 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 YWHAHQ04917 246 aaPredicted RBP4.39□□□□□ -1.71
USP47-211ENST00000531513 SCN1BQ07699 218 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 PPIGQ13427 754 aaKnown RBP eCLIP4.39□□□□□ -1.71
USP47-211ENST00000531513 TUBB2AQ13885 445 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 NFE2L1Q14494 772 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 KRT81Q14533 505 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 ZNF674Q2M3X9 581 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 RAPH1Q70E73 1250 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 SDCCAG8Q86SQ7 713 aaPredicted RBP4.39□□□□□ -1.71
USP47-211ENST00000531513 LDB1Q86U70 411 aaPredicted RBP4.39□□□□□ -1.71
USP47-211ENST00000531513 DCP1BQ8IZD4 617 aaKnown RBP4.39□□□□□ -1.71
USP47-211ENST00000531513 SIX6OS1Q8N1H7 587 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 IQUBQ8NA54 791 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 KDM1BQ8NB78 822 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 OR8H1Q8NGG4 311 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 MOSPD2Q8NHP6 518 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 CEP76Q8TAP6 659 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 MR1Q95460 341 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 CCDC43Q96MW1 224 aaKnown RBP4.39□□□□□ -1.71
USP47-211ENST00000531513 MGME1Q9BQP7 344 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 ZPBPQ9BS86 351 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 TUBB2BQ9BVA1 445 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 SCNM1Q9BWG6 230 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 B3GNT4Q9C0J1 378 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 PPIL3Q9H2H8 161 aaKnown RBP4.39□□□□□ -1.71
USP47-211ENST00000531513 PIGMQ9H3S5 423 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms