RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 CFAP52Q8N1V2 620 aa8.41□□□□□ -1.06
CTNND1-225ENST00000530094 PCDH20Q8N6Y1 951 aaKnown RBP8.41□□□□□ -1.06
CTNND1-225ENST00000530094 FZD8Q9H461 694 aa8.41□□□□□ -1.06
CTNND1-225ENST00000530094 FANCFQ9NPI8 374 aa8.41□□□□□ -1.06
CTNND1-225ENST00000530094 FAM237BA0A1B0GVD1 139 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 SLC35G6P0C7Q6 338 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 CSF2RAP15509 400 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 ITPKBP27987 946 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 HNRNPH3P31942 346 aaKnown RBP8.4□□□□□ -1.06
CTNND1-225ENST00000530094 RFC2P35250 354 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 GRIA3P42263 894 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 WASP42768 502 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 BCAP31P51572 246 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 ZSWIM7Q19AV6 140 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 CERCAMQ5T4B2 595 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 C9orf64Q5T6V5 341 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 AAGABQ6PD74 315 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 FOXR1Q6PIV2 292 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 GALNT7Q86SF2 657 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 HCAR2Q8TDS4 363 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 RNF39Q9H2S5 420 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 DPEP3Q9H4B8 488 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 FAM83DQ9H4H8 585 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 CCDC177Q9NQR7 707 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-225ENST00000530094 XPR1Q9UBH6 696 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 NDRG2Q9UN36 371 aaKnown RBP8.4□□□□□ -1.06
CTNND1-225ENST00000530094 BTBD3Q9Y2F9 522 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 TSC22D2O75157 780 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 TFPIP10646 304 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 GNPDA1P46926 289 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 GSSP48637 474 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 ZNF132P52740 706 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 RABGGTBP53611 331 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 OLR1P78380 273 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 ZNF155Q12901 538 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-225ENST00000530094 MED27Q6P2C8 311 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 TMPRSS11AQ6ZMR5 421 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 TAF8Q7Z7C8 310 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 PARGQ86W56 976 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 TMEM192Q8IY95 271 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 OR14C36Q8NHC7 312 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 HERVK_113Q902F9 699 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 BAP1Q92560 729 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 SHDQ96IW2 340 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 TCF12Q99081 682 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 LGMNQ99538 433 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 SLC25A51Q9H1U9 297 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 MINDY3Q9H8M7 445 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 COPS7AQ9UBW8 275 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 SSR3Q9UNL2 185 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 SPEF2Q9C093 1822 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 NID2Q14112 1375 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 BUD23O43709 281 aaKnown RBP8.4□□□□□ -1.06
CTNND1-225ENST00000530094 LRIG2O94898 1065 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 CLDN9O95484 217 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 TOP3BO95985 862 aaKnown RBP8.4□□□□□ -1.06
CTNND1-225ENST00000530094 FAM163BP0C2L3 166 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 L1CAMP32004 1257 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 CAPGP40121 348 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 MAXP61244 160 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 IL10RBQ08334 325 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 HECTD2Q5U5R9 776 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 DEF8Q6ZN54 512 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 SLC26A9Q7LBE3 791 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 SLC4A11Q8NBS3 891 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 MAGEE2Q8TD90 523 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-225ENST00000530094 PXYLP1Q8TE99 480 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 S100ZQ8WXG8 99 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 BADQ92934 168 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 FUBP3Q96I24 572 aaKnown RBP eCLIP8.4□□□□□ -1.06
CTNND1-225ENST00000530094 MYOCQ99972 504 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 TMEM175Q9BSA9 504 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 RTKNQ9BST9 563 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 TAPBPLQ9BX59 468 aa8.4□□□□□ -1.06
CTNND1-225ENST00000530094 ELL3Q9HB65 397 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-225ENST00000530094 SAMHD1Q9Y3Z3 626 aaKnown RBP8.4□□□□□ -1.06
CTNND1-225ENST00000530094 POLR3HQ9Y535 204 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-225ENST00000530094 CDK14O94921 469 aa8.4□□□□□ -1.07
CTNND1-225ENST00000530094 C4BPAP04003 597 aaKnown RBP8.4□□□□□ -1.07
CTNND1-225ENST00000530094 PCCBP05166 539 aa8.4□□□□□ -1.07
CTNND1-225ENST00000530094 FAM153BP0C7A2 387 aa8.4□□□□□ -1.07
CTNND1-225ENST00000530094 NR2F6P10588 404 aa8.4□□□□□ -1.07
CTNND1-225ENST00000530094 NDUFS1P28331 727 aa8.4□□□□□ -1.07
CTNND1-225ENST00000530094 DPYSQ14117 519 aa8.4□□□□□ -1.07
CTNND1-225ENST00000530094 LPIN1Q14693 890 aa8.4□□□□□ -1.07
CTNND1-225ENST00000530094 CPSF6Q16630 551 aaKnown RBP eCLIP8.4□□□□□ -1.07
CTNND1-225ENST00000530094 FAM153CQ494X1 144 aa8.4□□□□□ -1.07
CTNND1-225ENST00000530094 GCNT6Q5T4J0 391 aa8.4□□□□□ -1.07
CTNND1-225ENST00000530094 FBXW8Q8N3Y1 598 aa8.4□□□□□ -1.07
CTNND1-225ENST00000530094 SFRP1Q8N474 314 aa8.4□□□□□ -1.07
CTNND1-225ENST00000530094 NMD3Q96D46 503 aaKnown RBP8.4□□□□□ -1.07
CTNND1-225ENST00000530094 ZNF514Q96K75 400 aaPredicted RBP8.4□□□□□ -1.07
CTNND1-225ENST00000530094 EXOC2Q96KP1 924 aa8.4□□□□□ -1.07
CTNND1-225ENST00000530094 C5orf34Q96MH7 638 aa8.4□□□□□ -1.07
CTNND1-225ENST00000530094 OSBPL11Q9BXB4 747 aa8.4□□□□□ -1.07
CTNND1-225ENST00000530094 RHOBTB2Q9BYZ6 727 aa8.4□□□□□ -1.07
CTNND1-225ENST00000530094 ING3Q9NXR8 418 aa8.4□□□□□ -1.07
CTNND1-225ENST00000530094 BTRCQ9Y297 605 aa8.4□□□□□ -1.07
CTNND1-225ENST00000530094 MYADML2A6NDP7 307 aa8.39□□□□□ -1.07
CTNND1-225ENST00000530094 NPEPPSL1A6NEC2 478 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms