RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 KCT2Q8NC54 265 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 HTR3CQ8WXA8 447 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 HSH2DQ96JZ2 352 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 VAT1Q99536 393 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 SLC25A51Q9H1U9 297 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 USP29Q9HBJ7 922 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 TCF7L1Q9HCS4 588 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 PYCARDQ9ULZ3 195 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 ZFR2Q9UPR6 939 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 TMED5Q9Y3A6 229 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 PPIL1Q9Y3C6 166 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 THADAQ6YHU6 1953 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 TRBV23-1A0A0A0MS06 115 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 A0A1B0GTW7 788 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 A0A1W2PQU0 124 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 USP27XA6NNY8 438 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 PRR5-ARHGAP8B1AHC4 643 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 PATE3B3GLJ2 98 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 H7C0C1 242 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 WNT9AO14904 365 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 LSM1O15116 133 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 BCAT2O15382 392 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 SPINT1O43278 529 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 PGLSO95336 258 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 PAK4O96013 591 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 PRLP01236 227 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 PDHA1P08559 390 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 SERPINF2P08697 491 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 ALOX15P16050 662 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 PRLRP16471 622 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 XPAP23025 273 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 MAT2AP31153 395 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 CD68P34810 354 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 ATP5OP48047 213 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 EIF3EP60228 445 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 RPS21P63220 83 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 ELP6Q0PNE2 266 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 TRAF2Q12933 501 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 SF3A2Q15428 464 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 ZNF284Q2VY69 593 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 TRIM61Q5EBN2 209 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 TEX35Q5T0J7 233 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 ARMC12Q5T9G4 340 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 SEL1L2Q5TEA6 688 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 SEL1L3Q68CR1 1132 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 KIAA1161Q6NSJ0 714 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 DARS2Q6PI48 645 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 RAPH1Q70E73 1250 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 RABEPKQ7Z6M1 372 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 ZNF567Q8N184 647 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 CBARPQ8N350 705 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 SLC35F6Q8N357 371 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 ZSCAN1Q8NBB4 408 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 SLC35B2Q8TB61 432 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 CCDC110Q8TBZ0 833 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 PIH1D2Q8WWB5 315 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 ASB12Q8WXK4 309 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 SNX19Q92543 992 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 TADA1Q96BN2 335 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 DTNBP1Q96EV8 351 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 SCRN2Q96FV2 425 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 IMP4Q96G21 291 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 QKIQ96PU8 341 aaKnown RBP eCLIP6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 TCF12Q99081 682 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 FAM118BQ9BPY3 351 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 NUSAP1Q9BXS6 441 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 SLC17A9Q9BYT1 436 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 CEP41Q9BYV8 373 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 SMOC1Q9H4F8 434 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 IFT22Q9H7X7 185 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 C10orf88Q9H8K7 445 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 GLOD4Q9HC38 313 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 TM9SF3Q9HD45 589 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 KCND1Q9NSA2 647 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 SUSD2Q9UGT4 822 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 SLC6A14Q9UN76 642 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 APOBEC2Q9Y235 224 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 ANKRD6Q9Y2G4 727 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 RAI2Q9Y5P3 530 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 HS3ST3A1Q9Y663 406 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 SLCO1B1Q9Y6L6 691 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 NUMA1Q14980 2115 aa6.27□□□□□ -1.41
ATPAF1-209ENST00000529214 ATXN2Q99700 1313 aaKnown RBP6.26□□□□□ -1.41
ATPAF1-209ENST00000529214 SDK1Q7Z5N4 2213 aa6.26□□□□□ -1.41
ATPAF1-209ENST00000529214 ARPC4-TTLL3A0A0A6YYG9 625 aa6.26□□□□□ -1.41
ATPAF1-209ENST00000529214 TRAV20A0A0B4J274 112 aa6.26□□□□□ -1.41
ATPAF1-209ENST00000529214 A0A1W2PR77 199 aa6.26□□□□□ -1.41
ATPAF1-209ENST00000529214 C5orf60A6NFR6 353 aa6.26□□□□□ -1.41
ATPAF1-209ENST00000529214 IGLON5A6NGN9 336 aa6.26□□□□□ -1.41
ATPAF1-209ENST00000529214 ANKRD66B4E2M5 251 aa6.26□□□□□ -1.41
ATPAF1-209ENST00000529214 PRAMEF26H0Y7S4 382 aa6.26□□□□□ -1.41
ATPAF1-209ENST00000529214 NEMP1O14524 444 aa6.26□□□□□ -1.41
ATPAF1-209ENST00000529214 NDUFAB1O14561 156 aa6.26□□□□□ -1.41
ATPAF1-209ENST00000529214 SLC31A1O15431 190 aa6.26□□□□□ -1.41
ATPAF1-209ENST00000529214 MMP20O60882 483 aa6.26□□□□□ -1.41
ATPAF1-209ENST00000529214 KCNJ13O60928 360 aa6.26□□□□□ -1.41
ATPAF1-209ENST00000529214 TM7SF2O76062 418 aa6.26□□□□□ -1.41
ATPAF1-209ENST00000529214 ATE1O95260 518 aa6.26□□□□□ -1.41
ATPAF1-209ENST00000529214 MT-CYBP00156 380 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms