RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 PIH1D2Q8WWB5 315 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 CATSPER2Q96P56 530 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 OLFM3Q96PB7 478 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 IL12RB2Q99665 862 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 POLR1EQ9GZS1 481 aaKnown RBP8.44□□□□□ -1.06
SSBP3-212ENST00000528930 LACRTQ9GZZ8 138 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 RBM22Q9NW64 420 aaKnown RBP eCLIP8.44□□□□□ -1.06
SSBP3-212ENST00000528930 B4GALT6Q9UBX8 382 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 AMACRQ9UHK6 382 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 HEY1Q9Y5J3 304 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 DUSP10Q9Y6W6 482 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 STAB1Q9NY15 2570 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 ZNF469Q96JG9 3925 aaPredicted RBP8.44□□□□□ -1.06
SSBP3-212ENST00000528930 HEATR9A2RTY3 570 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 BTNL10A8MVZ5 291 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.43□□□□□ -1.06
SSBP3-212ENST00000528930 KCNK1O00180 336 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 TOR1BO14657 336 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 RECQL5O94762 991 aaPredicted RBP8.43□□□□□ -1.06
SSBP3-212ENST00000528930 HEXIM1O94992 359 aaKnown RBP8.43□□□□□ -1.06
SSBP3-212ENST00000528930 CPP00450 1065 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 PRLP01236 227 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 JCHAINP01591 159 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 MMP2P08253 660 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 ELFN1P0C7U0 828 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 ZFXP17010 805 aaPredicted RBP8.43□□□□□ -1.06
SSBP3-212ENST00000528930 LHCGRP22888 699 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 CES1P23141 567 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 UGT1A5P35504 534 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 MARCKSL1P49006 195 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 PEX5P50542 639 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 HNRNPKP61978 463 aaKnown RBP eCLIP8.43□□□□□ -1.06
SSBP3-212ENST00000528930 IFI35P80217 286 aaPredicted RBP8.43□□□□□ -1.06
SSBP3-212ENST00000528930 DSC2Q02487 901 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 GABPB1Q06547 395 aaPredicted RBP8.43□□□□□ -1.06
SSBP3-212ENST00000528930 ITKQ08881 620 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 ZBTB17Q13105 803 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 EIF3IQ13347 325 aaKnown RBP8.43□□□□□ -1.06
SSBP3-212ENST00000528930 PTK2BQ14289 1009 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 INPP5AQ14642 412 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 CNGA3Q16281 694 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 ARMC12Q5T9G4 340 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 C11orf63Q6NUN7 778 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 SPOCD1Q6ZMY3 1216 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 JAMLQ86YT9 394 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 RFX6Q8HWS3 928 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 KATNAL2Q8IYT4 538 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 PELI3Q8N2H9 469 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 PLA2G15Q8NCC3 412 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 CCNYQ8ND76 341 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 ACRBPQ8NEB7 543 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.43□□□□□ -1.06
SSBP3-212ENST00000528930 KRT35Q92764 455 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 FUBP1Q96AE4 644 aaKnown RBP8.43□□□□□ -1.06
SSBP3-212ENST00000528930 SCRN2Q96FV2 425 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 COQ10AQ96MF6 247 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 SMIM14Q96QK8 99 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 MCCC1Q96RQ3 725 aaPredicted RBP8.43□□□□□ -1.06
SSBP3-212ENST00000528930 BAG1Q99933 345 aaPredicted RBP8.43□□□□□ -1.06
SSBP3-212ENST00000528930 APOOQ9BUR5 198 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 C1QTNF7Q9BXJ2 289 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 MAK16Q9BXY0 300 aaKnown RBP8.43□□□□□ -1.06
SSBP3-212ENST00000528930 TCEAL2Q9H3H9 227 aaPredicted RBP8.43□□□□□ -1.06
SSBP3-212ENST00000528930 PRDM8Q9NQV8 689 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 DNAJC28Q9NX36 388 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 IMPACTQ9P2X3 320 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 TP53TG5Q9Y2B4 290 aa8.43□□□□□ -1.06
SSBP3-212ENST00000528930 ACANP16112 2415 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 hCG_1818297A0A087WSY0 165 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 A0A0J9YYE9 177 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 A0A0U1RQJ8 604 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 A0A0U1RQS6 177 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 NPIPB15A6NHN6 443 aaPredicted RBP8.42□□□□□ -1.06
SSBP3-212ENST00000528930 SCAMP1O15126 338 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 CST8O60676 142 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 GCATO75600 419 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 NEBLO76041 1014 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 ZRANB2O95218 330 aaKnown RBP eCLIP8.42□□□□□ -1.06
SSBP3-212ENST00000528930 TRBC1P01850 177 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 ALPIP09923 528 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 CTPS1P17812 591 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 VIPR1P32241 457 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 TRIM23P36406 574 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 VAV2P52735 878 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 THOP1P52888 689 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 DYNLT1P63172 113 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 MTM1Q13496 603 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 PDK1Q15118 436 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 LLGL1Q15334 1064 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 EIF2S3LQ2VIR3 472 aaKnown RBP8.42□□□□□ -1.06
SSBP3-212ENST00000528930 KCTD16Q68DU8 428 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 ESRP1Q6NXG1 681 aaKnown RBP8.42□□□□□ -1.06
SSBP3-212ENST00000528930 MACC1Q6ZN28 852 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 B4GALNT4Q76KP1 1039 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 HSD11B1LQ7Z5J1 315 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 TECPR1Q7Z6L1 1165 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 DAAM2Q86T65 1068 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 TSPAN33Q86UF1 283 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 RCOR2Q8IZ40 523 aa8.42□□□□□ -1.06
SSBP3-212ENST00000528930 RBFAQ8N0V3 343 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms