RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 NMRK2Q9NPI5 230 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 TLR9Q9NR96 1032 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 GPR45Q9Y5Y3 372 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 GREB1Q4ZG55 1949 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 PTPRDP23468 1912 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 MTMR11A4FU01 709 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 SNX2O60749 519 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 NDST3O95803 873 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 CKBP12277 381 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 ZNF23P17027 643 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 IL10P22301 178 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 FASP25445 335 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 TXNL4AP83876 142 aaKnown RBP7.39□□□□□ -1.23
C11orf54-207ENST00000528288 TMED1Q13445 227 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 LAPTM5Q13571 262 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 NEDD8Q15843 81 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 NFE2Q16621 373 aaPredicted RBP7.39□□□□□ -1.23
C11orf54-207ENST00000528288 LRRC23Q53EV4 343 aaPredicted RBP7.39□□□□□ -1.23
C11orf54-207ENST00000528288 BLOC1S3Q6QNY0 202 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 BEND5Q7L4P6 421 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 CLHC1Q8NHS4 586 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 RIN3Q8TB24 985 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 SGCDQ92629 289 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 TFAP2CQ92754 450 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 TMEM125Q96AQ2 219 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 FEM1CQ96JP0 617 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 BIRC8Q96P09 236 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 TRMOQ9BU70 441 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 ADI1Q9BV57 179 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 TDRD1Q9BXT4 1180 aaKnown RBP7.39□□□□□ -1.23
C11orf54-207ENST00000528288 TM6SF2Q9BZW4 377 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 SCUBE2Q9NQ36 999 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 CCM2LQ9NUG4 571 aaPredicted RBP7.39□□□□□ -1.23
C11orf54-207ENST00000528288 UTS2RQ9UKP6 389 aa7.39□□□□□ -1.23
C11orf54-207ENST00000528288 IGLV3-10A0A075B6K4 115 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 CCDC154A6NI56 674 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 E5RI56 91 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 BNIP3LO60238 219 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 RSL1D1O76021 490 aaKnown RBP7.38□□□□□ -1.23
C11orf54-207ENST00000528288 KLKB1P03952 638 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 HLA-DPA1P20036 260 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 OXCT1P55809 520 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 ERVPABLB-1P60509 514 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 RPL26P61254 145 aaKnown RBP7.38□□□□□ -1.23
C11orf54-207ENST00000528288 CTSL3PQ5NE16 218 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 NANOGP8Q6NSW7 305 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 LETMD1Q6P1Q0 360 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 IL27RAQ6UWB1 636 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 LRRC49Q8IUZ0 686 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 HS3ST5Q8IZT8 346 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 KIAA1191Q96A73 305 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 PPP1R2P1Q96PQ5 205 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 TBCDQ9BTW9 1192 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 APOL5Q9BWW9 433 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 RPF2Q9H7B2 306 aaKnown RBP7.38□□□□□ -1.23
C11orf54-207ENST00000528288 NANOGQ9H9S0 305 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 SDR39U1Q9NRG7 319 aaPredicted RBP7.38□□□□□ -1.23
C11orf54-207ENST00000528288 PNPLA3Q9NST1 481 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 UBA2Q9UBT2 640 aaPredicted RBP7.38□□□□□ -1.23
C11orf54-207ENST00000528288 RSL24D1Q9UHA3 163 aaKnown RBP7.38□□□□□ -1.23
C11orf54-207ENST00000528288 OAS3Q9Y6K5 1087 aaKnown RBP7.38□□□□□ -1.23
C11orf54-207ENST00000528288 NUP214P35658 2090 aaPredicted RBP7.38□□□□□ -1.23
C11orf54-207ENST00000528288 KRT87PA6NCN2 255 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 DRGXA6NNA5 263 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 K7ERQ8 282 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 INSIG1O15503 277 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 CLOCKO15516 846 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 KERAO60938 352 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 CAPNS1P04632 268 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 ATF6P18850 670 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 NR4A1P22736 598 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 PSMD8P48556 350 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 ZNF140P52738 457 aaPredicted RBP7.38□□□□□ -1.23
C11orf54-207ENST00000528288 INPP5AQ14642 412 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 PARP15Q460N3 678 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 GPR107Q5VW38 600 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 PPP4R4Q6NUP7 873 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 GPSM1Q86YR5 675 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 TMEM126BQ8IUX1 230 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 ABI1Q8IZP0 508 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 SOCS4Q8WXH5 440 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 HSPBAP1Q96EW2 488 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 C8orf48Q96LL4 319 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 TRIB3Q96RU7 358 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 BOCQ9BWV1 1114 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 TFB2MQ9H5Q4 396 aaKnown RBP7.38□□□□□ -1.23
C11orf54-207ENST00000528288 MRPL40Q9NQ50 206 aaKnown RBP7.38□□□□□ -1.23
C11orf54-207ENST00000528288 FARSBQ9NSD9 589 aaKnown RBP7.38□□□□□ -1.23
C11orf54-207ENST00000528288 NDUFA13Q9P0J0 144 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 TRMT6Q9UJA5 497 aaKnown RBP7.38□□□□□ -1.23
C11orf54-207ENST00000528288 FCF1Q9Y324 198 aaKnown RBP7.38□□□□□ -1.23
C11orf54-207ENST00000528288 PCDHA9Q9Y5H5 950 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 RAI2Q9Y5P3 530 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 SEPT4O43236 478 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 SLC22A3O75751 556 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 CAPN1P07384 714 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 TFPTP0C1Z6 253 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 G6PDP11413 515 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 ELK4P28324 431 aa7.38□□□□□ -1.23
C11orf54-207ENST00000528288 HTR7P34969 479 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms