RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 GLYATL1P3A0A0U1RQE8 302 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 TCRBV7S2A1N4TA0A589 114 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 CASC3O15234 703 aaKnown RBP11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 PPM1DO15297 605 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 CDK14O94921 469 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 CRTAMO95727 393 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 CPNE6O95741 557 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 MPOP05164 745 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 ACP5P13686 325 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 F3P13726 295 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 EIF2S3P41091 472 aaKnown RBP11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 INHBCP55103 352 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 TMEM115Q12893 351 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 CHRNA6Q15825 494 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 LDLRAP1Q5SW96 308 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 KCTD11Q693B1 232 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 DENND5AQ6IQ26 1287 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 PIM3Q86V86 326 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 LRRTM4Q86VH4 590 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 SFRP1Q8N474 314 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 TRIM58Q8NG06 486 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 PATE1Q8WXA2 126 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 TMEM159Q96B96 161 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 SH3KBP1Q96B97 665 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 DPYSL5Q9BPU6 564 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 TBL1YQ9BQ87 522 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 TIMM29Q9BSF4 260 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 TMEM121Q9BTD3 319 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 ZCCHC2Q9C0B9 1178 aaKnown RBP11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 SYNDIG1Q9H7V2 258 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 SARS2Q9NP81 518 aaKnown RBP11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 LZTFL1Q9NQ48 299 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 SMOXQ9NWM0 555 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 SATB2Q9UPW6 733 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 PRKAB1Q9Y478 270 aa11.96□□□□□ -0.49
TRAPPC4-209ENST00000528230 KIR2DS5A0A0G2JLQ3 304 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 A0A0G2JNG1 304 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 A6NCN8 305 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 ERI2A8K979 691 aaKnown RBP11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 KIR2DS3K7RE56 304 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 RRP8O43159 456 aaKnown RBP11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 TLX3O43711 291 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 LIASO43766 372 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 METTL18O95568 372 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 ZNF7P17097 686 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 CD1CP29017 333 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 RBMS1P29558 406 aaKnown RBP11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 ALDH4A1P30038 563 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 OR1D5P58170 312 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 GPLD1P80108 840 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 GTF2H3Q13889 308 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 KIR2DS5Q14953 304 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 OASLQ15646 514 aaKnown RBP11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 C3orf38Q5JPI3 329 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 ZNF648Q5T619 568 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 FAM151BQ6UXP7 276 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 LRRC69Q6ZNQ3 347 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 B3GNT8Q7Z7M8 397 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 SLC9B2Q86UD5 537 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 ZNF547Q8IVP9 402 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 DDHD1Q8NEL9 900 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 ZNF398Q8TD17 642 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 SLC37A2Q8TED4 501 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 PRR11Q96HE9 360 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 TTC25Q96NG3 672 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 APOL2Q9BQE5 337 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 STN1Q9H668 368 aaKnown RBP11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 LRRC40Q9H9A6 602 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 GRPEL1Q9HAV7 217 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 ARFGAP3Q9NP61 516 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 ASCL3Q9NQ33 180 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 THSD1Q9NS62 852 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 KLC4Q9NSK0 619 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 TBC1D29Q9UFV1 150 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 ATXN7L1Q9ULK2 861 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 KCNK6Q9Y257 313 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 PPP2R2CQ9Y2T4 447 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 ARL5AQ9Y689 179 aa11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 DNMT3AQ9Y6K1 912 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC4-209ENST00000528230 A0A1W2PNU3 283 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 PRR19A6NJB7 356 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 AGAP14A8MT82 685 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 CDRT15L2A8MXV6 281 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 GAPDHSO14556 408 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 PLD2O14939 933 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 BUD23O43709 281 aaKnown RBP11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 UGT1A9O60656 530 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 MTX2O75431 263 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 EML2O95834 649 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 VCLP18206 1134 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 UGT1A6P19224 532 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 UGT1A1P22309 533 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 UGT1A4P22310 534 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 UGT1A3P35503 534 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 UGT1A5P35504 534 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 HADHAP40939 763 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 GDF10P55107 478 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 OLIG2Q13516 323 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 SPARCL1Q14515 664 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms