RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 TMPRSS3P57727 454 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 OLIG2Q13516 323 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 PTPRCAPQ14761 206 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 CLPPQ16740 277 aaPredicted RBP10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 ATP13A5Q4VNC0 1218 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 ZNF569Q5MCW4 686 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 BROXQ5VW32 411 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 CRTC3Q6UUV7 619 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 ZNF547Q8IVP9 402 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 LRRC57Q8N9N7 239 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 IPMKQ8NFU5 416 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 ACTL9Q8TC94 416 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 SNRNP27Q8WVK2 155 aaKnown RBP10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 RBM41Q96IZ5 413 aaKnown RBP10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 ZSCAN5AQ9BUG6 496 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 IL26Q9NPH9 171 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 KLC4Q9NSK0 619 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 KCNK4Q9NYG8 393 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 KLHL8Q9P2G9 620 aaPredicted RBP10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 TRIM10Q9UDY6 481 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 CFAP46Q8IYW2 2715 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 TEX51A0A1B0GUA7 166 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 H7C0C1 242 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 GPR39O43194 453 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 MTSS1O43312 755 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 UGT1A9O60656 530 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 JMJD7P0C870 316 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 THRAP10827 490 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 PYGMP11217 842 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 UGT1A6P19224 532 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 UGT1A1P22309 533 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 UGT1A4P22310 534 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 UGT1A3P35503 534 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 HMGCLP35914 325 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 ATP5OP48047 213 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 CLCNKAP51800 687 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 COPS2P61201 443 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 UBE2IP63279 158 aaKnown RBP10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 OTUD4Q01804 1114 aaKnown RBP10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 VAC14Q08AM6 782 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 MSLNQ13421 630 aaPredicted RBP10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 XRCC4Q13426 336 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 NFATC2Q13469 925 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 BIRC2Q13490 618 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 PEX6Q13608 980 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 SLC1A5Q15758 541 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 PLA2G4EQ3MJ16 856 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 CCDC70Q6NSX1 233 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 TMEM71Q6P5X7 295 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 C11orf96Q7Z7L8 435 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 OR4D9Q8NGE8 314 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 SLC39A7Q92504 469 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 TMEM159Q96B96 161 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 CCDC97Q96F63 343 aaPredicted RBP10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 PLEKHG4BQ96PX9 1271 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 VAT1Q99536 393 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 CMKLR1Q99788 373 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 ANP32EQ9BTT0 268 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 OSBPL8Q9BZF1 889 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 UGT1A7Q9HAW7 530 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 UGT1A10Q9HAW8 530 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 UGT1A8Q9HAW9 530 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 SARS2Q9NP81 518 aaKnown RBP10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 RAD18Q9NS91 495 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 OCIAD1Q9NX40 245 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 IL17CQ9P0M4 197 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 PDP2Q9P2J9 529 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 RSPH14Q9UHP6 348 aa10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.3□□□□□ -0.76
PRPF40B-204ENST00000527253 K7ENP7 123 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 HGSO14964 777 aaPredicted RBP10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 F3P13726 295 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 BRAFP15056 766 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 ZNF7P17097 686 aaPredicted RBP10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 WT1P19544 449 aaPredicted RBP10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 PTPN7P35236 360 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 ADRA1AP35348 466 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 VAV2P52735 878 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 UCNP55089 124 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 NAP1L1P55209 391 aaKnown RBP10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 HHEXQ03014 270 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 MPP3Q13368 585 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 CHRNA6Q15825 494 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 KIAA1614Q5VZ46 1190 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 PDPK2PQ6A1A2 396 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 INO80CQ6PI98 192 aaPredicted RBP10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 RANBP10Q6VN20 620 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 MICALCLQ6ZW33 695 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 DTX1Q86Y01 620 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 BLOC1S5Q8TDH9 187 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 TTC9Q92623 222 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 VPS35Q96QK1 796 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 SRPK1Q96SB4 655 aaKnown RBP10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 SLC38A3Q99624 504 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 BAG1Q99933 345 aaPredicted RBP10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 APOL2Q9BQE5 337 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 FICDQ9BVA6 458 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 TBC1D10AQ9BXI6 508 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 GBA3Q9H227 469 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 LUC7LQ9NQ29 371 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms