RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 NXPE1Q8N323 547 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 ZNF548Q8NEK5 533 aaPredicted RBP16.47■□□□□ 0.23
SMCO4-204ENST00000527149 FBXO25Q8TCJ0 367 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 TRIM39Q9HCM9 518 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 ZDHHC18Q9NUE0 388 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 UCKL1Q9NWZ5 548 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 APOBEC3BQ9UH17 382 aaKnown RBP16.47■□□□□ 0.23
SMCO4-204ENST00000527149 SUFUQ9UMX1 484 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 PCDHGB2Q9Y5G2 931 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 ST14Q9Y5Y6 855 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 TEX264Q9Y6I9 313 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.46■□□□□ 0.23
SMCO4-204ENST00000527149 CHUKO15111 745 aa16.46■□□□□ 0.23
SMCO4-204ENST00000527149 NUAK1O60285 661 aa16.46■□□□□ 0.23
SMCO4-204ENST00000527149 ZNF8P17098 575 aaPredicted RBP16.46■□□□□ 0.23
SMCO4-204ENST00000527149 DGKAP23743 735 aa16.46■□□□□ 0.23
SMCO4-204ENST00000527149 HNRNPKP61978 463 aaKnown RBP eCLIP16.46■□□□□ 0.23
SMCO4-204ENST00000527149 CACNG1Q06432 222 aa16.46■□□□□ 0.23
SMCO4-204ENST00000527149 SEMA3AQ14563 771 aa16.46■□□□□ 0.23
SMCO4-204ENST00000527149 FASTKD3Q14CZ7 662 aaKnown RBP16.46■□□□□ 0.23
SMCO4-204ENST00000527149 BBS9Q3SYG4 887 aa16.46■□□□□ 0.23
SMCO4-204ENST00000527149 ANKRD20A4Q4UJ75 823 aa16.46■□□□□ 0.23
SMCO4-204ENST00000527149 DNAJC21Q5F1R6 531 aaKnown RBP16.46■□□□□ 0.23
SMCO4-204ENST00000527149 CASC4Q6P4E1 433 aa16.46■□□□□ 0.23
SMCO4-204ENST00000527149 GATAD2AQ86YP4 633 aa16.46■□□□□ 0.23
SMCO4-204ENST00000527149 PDIK1LQ8N165 341 aa16.46■□□□□ 0.23
SMCO4-204ENST00000527149 SLC25A45Q8N413 288 aa16.46■□□□□ 0.23
SMCO4-204ENST00000527149 PNPLA1Q8N8W4 532 aa16.46■□□□□ 0.23
SMCO4-204ENST00000527149 NETO1Q8TDF5 533 aa16.46■□□□□ 0.23
SMCO4-204ENST00000527149 ZNF669Q96BR6 464 aaPredicted RBP16.46■□□□□ 0.23
SMCO4-204ENST00000527149 STAMBPL1Q96FJ0 436 aa16.46■□□□□ 0.23
SMCO4-204ENST00000527149 EBNA1BP2Q99848 306 aaKnown RBP16.46■□□□□ 0.23
SMCO4-204ENST00000527149 CLPBQ9H078 707 aa16.46■□□□□ 0.23
SMCO4-204ENST00000527149 OR2AG1Q9H205 316 aa16.46■□□□□ 0.23
SMCO4-204ENST00000527149 FAM96AQ9H5X1 160 aa16.46■□□□□ 0.23
SMCO4-204ENST00000527149 CARS2Q9HA77 564 aaKnown RBP16.46■□□□□ 0.23
SMCO4-204ENST00000527149 CYP4F12Q9HCS2 524 aa16.46■□□□□ 0.23
SMCO4-204ENST00000527149 SAMD15Q9P1V8 674 aa16.46■□□□□ 0.23
SMCO4-204ENST00000527149 MARCH4Q9P2E8 410 aaPredicted RBP16.46■□□□□ 0.23
SMCO4-204ENST00000527149 SLC30A1Q9Y6M5 507 aa16.46■□□□□ 0.23
SMCO4-204ENST00000527149 COL5A1P20908 1838 aaPredicted RBP16.46■□□□□ 0.23
SMCO4-204ENST00000527149 MAGEB16A2A368 324 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 GPR89AB7ZAQ6 455 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 TM4SF5O14894 197 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 SCAMP1O15126 338 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 SGTAO43765 313 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 VEGFDO43915 354 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 USP1O94782 785 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 GPR89BP0CG08 455 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 PGAM1P18669 254 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 ACRV1P26436 265 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 ECHS1P30084 290 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 HOXD11P31277 338 aaPredicted RBP16.45■□□□□ 0.22
SMCO4-204ENST00000527149 BLKP51451 505 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 CTSCP53634 463 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 PLTPP55058 493 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 ARL4CP56559 192 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 GUCY2DQ02846 1103 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 CALCOCO2Q13137 446 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 SLC14A1Q13336 389 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 CRYMQ14894 314 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 DBN1Q16643 649 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 PYCR3Q53H96 274 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 LDLRAP1Q5SW96 308 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 MARK2Q7KZI7 788 aaKnown RBP16.45■□□□□ 0.22
SMCO4-204ENST00000527149 SERPINA9Q86WD7 417 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 ZNF547Q8IVP9 402 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 ULK4Q96C45 1275 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 LRRC39Q96DD0 335 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 PHACTR1Q9C0D0 580 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 CRLS1Q9UJA2 301 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 BTBD3Q9Y2F9 522 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 MAD1L1Q9Y6D9 718 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 RPS6KL1Q9Y6S9 549 aa16.45■□□□□ 0.22
SMCO4-204ENST00000527149 PRR19A6NJB7 356 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 H3BM21 787 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 VAPBO95292 243 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 ASMTLO95671 621 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 ELK3P41970 407 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 GNPDA1P46926 289 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 PRAMEP78395 509 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 ARHGAP8P85298 464 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 TMEM115Q12893 351 aaPredicted RBP16.44■□□□□ 0.22
SMCO4-204ENST00000527149 PRRT3Q5FWE3 981 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 ZRANB3Q5FWF4 1079 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 DNTTIP2Q5QJE6 756 aaKnown RBP16.44■□□□□ 0.22
SMCO4-204ENST00000527149 STEAP4Q687X5 459 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 C11orf96Q7Z7L8 435 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 NRROSQ86YC3 692 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 RASGEF1AQ8N9B8 481 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 OR6P1Q8NGX9 317 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 OR4L1Q8NH43 312 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 OR2M4Q96R27 311 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 BOCQ9BWV1 1114 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 SLC13A1Q9BZW2 595 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 TMEM168Q9H0V1 697 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 RMI1Q9H9A7 625 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 EPB41L5Q9HCM4 733 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 TRNAU1APQ9NX07 287 aaKnown RBP16.44■□□□□ 0.22
SMCO4-204ENST00000527149 ZDHHC3Q9NYG2 299 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms