RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 POLR1CO15160 346 aaPredicted RBP14.07□□□□□ -0.16
CPSF1-201ENST00000526271 CYP1A2P05177 515 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 PIRTP0C851 137 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 TCN2P20062 427 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 CDK11BP21127 795 aaKnown RBP14.07□□□□□ -0.16
CPSF1-201ENST00000526271 KLHL30Q0D2K2 578 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 ZBTB17Q13105 803 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 PPP1R2P3Q6NXS1 205 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 CERS6Q6ZMG9 384 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 TMEM26Q6ZUK4 368 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 C11orf96Q7Z7L8 435 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 FATE1Q969F0 183 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 FAF2Q96CS3 445 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 ZPBPQ9BS86 351 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 HERPUD2Q9BSE4 406 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 OR2AG1Q9H205 316 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 CARD9Q9H257 536 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 FAM83DQ9H4H8 585 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 KLC4Q9NSK0 619 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 TLK1Q9UKI8 766 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 WDR37Q9Y2I8 494 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 DOPEY1Q5JWR5 2465 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 CELSR2Q9HCU4 2923 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 CRYBG3Q68DQ2 2970 aa14.07□□□□□ -0.16
CPSF1-201ENST00000526271 SEC16AO15027 2179 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 A0A087X0T9 212 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 KIR2DS5A0A0G2JLQ3 304 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 A0A0G2JNG1 304 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 A0A1B0GTH6 734 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 ANKRD66B4E2M5 251 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 GOLGA6L19H0YKK7 550 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 KIR2DS3K7RE56 304 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 AURKAO14965 403 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 MTX2O75431 263 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 PYGLP06737 847 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 CCDC172P0C7W6 258 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 FAM228BP0C875 321 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 MYBL1P10243 752 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 DESP17661 470 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 XRCC1P18887 633 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-201ENST00000526271 SERPINB6P35237 376 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 DLSTP36957 453 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 SEPHS1P49903 392 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 TPM4P67936 248 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 PEX6Q13608 980 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 ERV3-1Q14264 604 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 GALNT3Q14435 633 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 PIGHQ14442 188 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-201ENST00000526271 KIR2DS5Q14953 304 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 PLA2G4EQ3MJ16 856 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 CRTC3Q6UUV7 619 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 SLC9B2Q86UD5 537 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 RAVER1Q8IY67 606 aaKnown RBP14.06□□□□□ -0.16
CPSF1-201ENST00000526271 BBS5Q8N3I7 341 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 FAM26EQ8N5C1 309 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 RNF214Q8ND24 703 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 TADA1Q96BN2 335 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 ELMO2Q96JJ3 720 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 TGM7Q96PF1 710 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 NUP85Q9BW27 656 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 ULBP3Q9BZM4 244 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 UCK1Q9HA47 277 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 RCOR3Q9P2K3 495 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-201ENST00000526271 LRBAP50851 2863 aa14.06□□□□□ -0.16
CPSF1-201ENST00000526271 OR52A4PA6NMU1 304 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 KCNK1O00180 336 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 KIAA0754O94854 1291 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 KRT7P08729 469 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 CCNCP24863 283 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 PBX1P40424 430 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 CD86P42081 329 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 EPHB1P54762 984 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 RPL26P61254 145 aaKnown RBP14.05□□□□□ -0.16
CPSF1-201ENST00000526271 FOXM1Q08050 763 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 KLRB1Q12918 225 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 ANKRD20A8PQ5CZ79 823 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 ALS2CLQ60I27 953 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 TCTN3Q6NUS6 607 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 KDELC2Q7Z4H8 507 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 TMC3Q7Z5M5 1100 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 ESX1Q8N693 406 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 ANKRD20A12PQ8NF67 263 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 KLHL6Q8WZ60 621 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 KIAA1143Q96AT1 154 aaPredicted RBP14.05□□□□□ -0.16
CPSF1-201ENST00000526271 OR6C1Q96RD1 312 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 CEP41Q9BYV8 373 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 ZMYND15Q9H091 742 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 ZNF768Q9H5H4 540 aaKnown RBP14.05□□□□□ -0.16
CPSF1-201ENST00000526271 RMI1Q9H9A7 625 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 MRPL47Q9HD33 250 aaKnown RBP14.05□□□□□ -0.16
CPSF1-201ENST00000526271 ANAPC7Q9UJX3 599 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 RPL26L1Q9UNX3 145 aaKnown RBP14.05□□□□□ -0.16
CPSF1-201ENST00000526271 TTLL3Q9Y4R7 772 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 SPO11Q9Y5K1 396 aa14.05□□□□□ -0.16
CPSF1-201ENST00000526271 CSMD1Q96PZ7 3565 aa14.04□□□□□ -0.16
CPSF1-201ENST00000526271 GPR39O43194 453 aa14.04□□□□□ -0.16
CPSF1-201ENST00000526271 SPAG6O75602 509 aa14.04□□□□□ -0.16
CPSF1-201ENST00000526271 UBXN7O94888 489 aa14.04□□□□□ -0.16
CPSF1-201ENST00000526271 JCHAINP01591 159 aa14.04□□□□□ -0.16
CPSF1-201ENST00000526271 FGF5P12034 268 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms