RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 EIF3CLB5ME19 914 aaKnown RBP6.49□□□□□ -1.37
CD44-221ENST00000526000 MKRN2OSH3BPM6 223 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 FZD6O60353 706 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 VPS4BO75351 444 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 SPAG6O75602 509 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 UBXN7O94888 489 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 SLC25A14O95258 325 aaPredicted RBP6.49□□□□□ -1.37
CD44-221ENST00000526000 NDUFA10O95299 355 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 TIAF1O95411 115 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 DLGAP3O95886 979 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 VIPP01282 170 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 JCHAINP01591 159 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 RNF224P0DH78 156 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 F3P13726 295 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 IL4RP24394 825 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 TEAD1P28347 426 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 MAN1A1P33908 653 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 CD86P42081 329 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 FASLGP48023 281 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 SPINT3P49223 89 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 ZNF75DP51815 510 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 DRG2P55039 364 aaKnown RBP6.49□□□□□ -1.37
CD44-221ENST00000526000 ZBED6P86452 979 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 KLHL30Q0D2K2 578 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 GALNT3Q14435 633 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 GSE1Q14687 1217 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 KCNAB1Q14722 419 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 QPCTQ16769 361 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 EIF2S3LQ2VIR3 472 aaKnown RBP6.49□□□□□ -1.37
CD44-221ENST00000526000 NADK2Q4G0N4 442 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 BOLA3Q53S33 107 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 ZFYVE27Q5T4F4 411 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 FAM69BQ5VUD6 431 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 CERS6Q6ZMG9 384 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 TMEM26Q6ZUK4 368 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 PLXDC1Q8IUK5 500 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 CNGA4Q8IV77 575 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 CCDC13Q8IYE1 715 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 EFCAB3Q8N7B9 438 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 CCNYQ8ND76 341 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 CT55Q8WUE5 264 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 STAMBPL1Q96FJ0 436 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 C9orf72Q96LT7 481 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 EIF3CQ99613 913 aaKnown RBP6.49□□□□□ -1.37
CD44-221ENST00000526000 SYT11Q9BT88 431 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 SPATA16Q9BXB7 569 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 CEP41Q9BYV8 373 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.49□□□□□ -1.37
CD44-221ENST00000526000 BRD8Q9H0E9 1235 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 TRIT1Q9H3H1 467 aaKnown RBP6.49□□□□□ -1.37
CD44-221ENST00000526000 GRPEL1Q9HAV7 217 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 PCDH9Q9HC56 1237 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 BPIFA1Q9NP55 256 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 CASS4Q9NQ75 786 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 ZNF624Q9P2J8 865 aaPredicted RBP6.49□□□□□ -1.37
CD44-221ENST00000526000 PLEKHB1Q9UF11 243 aaPredicted RBP6.49□□□□□ -1.37
CD44-221ENST00000526000 KCND3Q9UK17 655 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 PADI1Q9ULC6 663 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 CAPN11Q9UMQ6 739 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 VPS4AQ9UN37 437 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 POLHQ9Y253 713 aa6.49□□□□□ -1.37
CD44-221ENST00000526000 LUC7L2Q9Y383 392 aaKnown RBP6.49□□□□□ -1.37
CD44-221ENST00000526000 CLEC18AA5D8T8 446 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 A6NCN8 305 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 ARGFXA6NJG6 315 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 A6NL46 340 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 OR52A4PA6NMU1 304 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 KCNK1O00180 336 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 MATN3O15232 486 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 MFSD11O43934 449 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 NUAK1O60285 661 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 SEMA7AO75326 666 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 CREG1O75629 220 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 HLA-DQB2P05538 268 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 CCNYL3P0C7X3 344 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 FOLR1P15328 257 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 ZNF7P17097 686 aaPredicted RBP6.48□□□□□ -1.37
CD44-221ENST00000526000 HNRNPH3P31942 346 aaKnown RBP6.48□□□□□ -1.37
CD44-221ENST00000526000 CASP14P31944 242 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 PRKCIP41743 596 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 ARCN1P48444 511 aaKnown RBP6.48□□□□□ -1.37
CD44-221ENST00000526000 GSDMDP57764 484 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 PPP1CAP62136 330 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 SLC10A2Q12908 348 aaPredicted RBP6.48□□□□□ -1.37
CD44-221ENST00000526000 DNASE1L3Q13609 305 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 LRP8Q14114 963 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 PCSK7Q16549 785 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 DPYSL2Q16555 572 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 INSCQ1MX18 579 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 PRR30Q53SZ7 412 aaPredicted RBP6.48□□□□□ -1.37
CD44-221ENST00000526000 ANKRD20A8PQ5CZ79 823 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 FHL5Q5TD97 284 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 PRAMEF17Q5VTA0 474 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 CPZQ66K79 652 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 TCTN3Q6NUS6 607 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 FBXO38Q6PIJ6 1188 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 CLEC18BQ6UXF7 455 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 ZNF765Q7L2R6 523 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 ADGRG6Q86SQ4 1221 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 PSTKQ8IV42 348 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms