RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 CCDC88CQ9P219 2028 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 A0A0J9YYE9 177 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 CCDC66A2RUB6 948 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 CLEC18AA5D8T8 446 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 MIF4GDA9UHW6 222 aaKnown RBP9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 STK17BO94768 372 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 TRBC1P01850 177 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 NTRK1P04629 796 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 ATP1A1P05023 1023 aaKnown RBP9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 PYGLP06737 847 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 GP1BBP13224 206 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 TCF4P15884 667 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 COMTP21964 271 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 IL1R2P27930 398 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 CETN2P41208 172 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 MAPK9P45984 424 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 SLC25A11Q02978 314 aaKnown RBP9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 ITKQ08881 620 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 ABHD18Q0P651 414 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 KRT81Q14533 505 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 ZFYVE27Q5T4F4 411 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 ATP1A1-AS1Q5TC04 95 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 C16orf46Q6P387 395 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 CLEC18BQ6UXF7 455 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 ZNF765Q7L2R6 523 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 CHST15Q7LFX5 561 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 PEX26Q7Z412 305 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 VSIG1Q86XK7 387 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 LURAP1LQ8IV03 231 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 NDUFAF2Q8N183 169 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 UBL4BQ8N7F7 174 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 CLEC18CQ8NCF0 446 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 EXD1Q8NHP7 514 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 APOBEC4Q8WW27 367 aaKnown RBP9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 HSPH1Q92598 858 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 COX14Q96I36 57 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 ZNF830Q96NB3 372 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 CSPG4P5Q96PW8 444 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 ZPBPQ9BS86 351 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 EFHD1Q9BUP0 239 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 RIOK2Q9BVS4 552 aaKnown RBP9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 STN1Q9H668 368 aaKnown RBP9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 LZTFL1Q9NQ48 299 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 FBXO8Q9NRD0 319 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 TBC1D29Q9UFV1 150 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 ZNHIT2Q9UHR6 403 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 AMFRQ9UKV5 643 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 TFR2Q9UP52 801 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 TMEM184BQ9Y519 407 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 DUSP10Q9Y6W6 482 aa9.48□□□□□ -0.89
TRAPPC4-206ENST00000525303 PRR19A6NJB7 356 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 ZNF487B1APH4 448 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 POLR1CO15160 346 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 FZD6O60353 706 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 DNAJC6O75061 913 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 DLGAP3O95886 979 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 RARAP10276 462 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 ZNF30P17039 623 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 TCN2P20062 427 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 SERPINB6P35237 376 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 STC1P52823 247 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 EPHB1P54762 984 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 MC1RQ01726 317 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 SEPT6Q14141 434 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 LACTB2Q53H82 288 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 IYDQ6PHW0 289 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 NLRP8Q86W28 1048 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 KCTD6Q8NC69 237 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 SH3KBP1Q96B97 665 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 RNF31Q96EP0 1072 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 RBM41Q96IZ5 413 aaKnown RBP9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 ZNF670Q9BS34 389 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 TBC1D10AQ9BXI6 508 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 TRIT1Q9H3H1 467 aaKnown RBP9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 SARS2Q9NP81 518 aaKnown RBP9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 VPS18Q9P253 973 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 KCNK6Q9Y257 313 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 PLAAQ9Y263 795 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 MAN2B2Q9Y2E5 1009 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 MRPS18BQ9Y676 258 aaKnown RBP9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 OAS3Q9Y6K5 1087 aaKnown RBP9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 HIVEP3Q5T1R4 2406 aa9.47□□□□□ -0.89
TRAPPC4-206ENST00000525303 GRID2IPA4D2P6 1211 aa9.46□□□□□ -0.9
TRAPPC4-206ENST00000525303 A6NCN8 305 aa9.46□□□□□ -0.9
TRAPPC4-206ENST00000525303 KIF5CO60282 957 aa9.46□□□□□ -0.9
TRAPPC4-206ENST00000525303 SNX2O60749 519 aa9.46□□□□□ -0.9
TRAPPC4-206ENST00000525303 CLDN7O95471 211 aa9.46□□□□□ -0.9
TRAPPC4-206ENST00000525303 ACP5P13686 325 aa9.46□□□□□ -0.9
TRAPPC4-206ENST00000525303 F3P13726 295 aa9.46□□□□□ -0.9
TRAPPC4-206ENST00000525303 NR1D1P20393 614 aa9.46□□□□□ -0.9
TRAPPC4-206ENST00000525303 F8A1P23610 371 aa9.46□□□□□ -0.9
TRAPPC4-206ENST00000525303 CTNNA2P26232 953 aa9.46□□□□□ -0.9
TRAPPC4-206ENST00000525303 CTNNA1P35221 906 aaKnown RBP9.46□□□□□ -0.9
TRAPPC4-206ENST00000525303 GJC1P36383 396 aa9.46□□□□□ -0.9
TRAPPC4-206ENST00000525303 STAT5AP42229 794 aa9.46□□□□□ -0.9
TRAPPC4-206ENST00000525303 EPHA4P54764 986 aa9.46□□□□□ -0.9
TRAPPC4-206ENST00000525303 COPS2P61201 443 aa9.46□□□□□ -0.9
TRAPPC4-206ENST00000525303 DSC2Q02487 901 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms